RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 LY6KQ17RY6 165 aa11□□□□□ -0.65
PALB2-206ENST00000568219 ZNF280DQ6N043 979 aa11□□□□□ -0.65
PALB2-206ENST00000568219 PSTKQ8IV42 348 aaKnown RBP11□□□□□ -0.65
PALB2-206ENST00000568219 NIM1KQ8IY84 436 aa11□□□□□ -0.65
PALB2-206ENST00000568219 OR8H2Q8N162 312 aa11□□□□□ -0.65
PALB2-206ENST00000568219 CNTD1Q8N815 330 aa11□□□□□ -0.65
PALB2-206ENST00000568219 SCAIQ8N9R8 606 aa11□□□□□ -0.65
PALB2-206ENST00000568219 SKA2Q8WVK7 121 aaPredicted RBP11□□□□□ -0.65
PALB2-206ENST00000568219 SMOXQ9NWM0 555 aa11□□□□□ -0.65
PALB2-206ENST00000568219 KIF17Q9P2E2 1029 aa11□□□□□ -0.65
PALB2-206ENST00000568219 IFT80Q9P2H3 777 aaPredicted RBP11□□□□□ -0.65
PALB2-206ENST00000568219 ITGB1BP2Q9UKP3 347 aa11□□□□□ -0.65
PALB2-206ENST00000568219 MTF2Q9Y483 593 aaPredicted RBP11□□□□□ -0.65
PALB2-206ENST00000568219 PLIN4Q96Q06 1357 aa11□□□□□ -0.65
PALB2-206ENST00000568219 C2CD4BA6NLJ0 364 aa11□□□□□ -0.65
PALB2-206ENST00000568219 H3BMM5 538 aa11□□□□□ -0.65
PALB2-206ENST00000568219 JUNP05412 331 aaKnown RBP11□□□□□ -0.65
PALB2-206ENST00000568219 ELK4P28324 431 aa11□□□□□ -0.65
PALB2-206ENST00000568219 PRDX6P30041 224 aa11□□□□□ -0.65
PALB2-206ENST00000568219 LIMK2P53671 638 aa11□□□□□ -0.65
PALB2-206ENST00000568219 PFKFB4Q16877 469 aa11□□□□□ -0.65
PALB2-206ENST00000568219 IER5Q5VY09 327 aa11□□□□□ -0.65
PALB2-206ENST00000568219 GADL1Q6ZQY3 521 aa11□□□□□ -0.65
PALB2-206ENST00000568219 ARMCX2Q7L311 632 aa11□□□□□ -0.65
PALB2-206ENST00000568219 TAS1R3Q7RTX0 852 aa11□□□□□ -0.65
PALB2-206ENST00000568219 PIWIL3Q7Z3Z3 882 aaKnown RBP11□□□□□ -0.65
PALB2-206ENST00000568219 C8orf59Q8N0T1 100 aaPredicted RBP11□□□□□ -0.65
PALB2-206ENST00000568219 VPS33AQ96AX1 596 aa11□□□□□ -0.65
PALB2-206ENST00000568219 TBCCD1Q9NVR7 557 aa11□□□□□ -0.65
PALB2-206ENST00000568219 SMPD3Q9NY59 655 aaPredicted RBP11□□□□□ -0.65
PALB2-206ENST00000568219 PRORSD1PA6NEY8 169 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 MAFGO15525 162 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 CHRM3P20309 590 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 NMBRP28336 390 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 CD151P48509 253 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 SULT2A1Q06520 285 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 ADIGQ0VDE8 80 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 PIGGQ5H8A4 983 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 DCDC5Q6ZRR9 648 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 CUZD1Q86UP6 607 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 ZNF567Q8N184 647 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 HM13Q8TCT9 377 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 HBEGFQ99075 208 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 ZBTB26Q9HCK0 441 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 SEMA4BQ9NPR2 832 aaPredicted RBP10.99□□□□□ -0.65
PALB2-206ENST00000568219 MORF4L1Q9UBU8 362 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 EMCNQ9ULC0 261 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 TRAF6Q9Y4K3 522 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 SNAP91O60641 907 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 GSNP06396 782 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 COL6A2P12110 1019 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 PRKAA2P54646 552 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 SLC10A2Q12908 348 aaPredicted RBP10.99□□□□□ -0.65
PALB2-206ENST00000568219 SEMA5AQ13591 1074 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 TIGD2Q4W5G0 525 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 DACT2Q5SW24 774 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 ANGPTL8Q6UXH0 198 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 GPR180Q86V85 440 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 SPNS2Q8IVW8 549 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 RDM1Q8NG50 284 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 TRPC4APQ8TEL6 797 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 COQ7Q99807 217 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 FDXACB1Q9BRP7 624 aaPredicted RBP10.99□□□□□ -0.65
PALB2-206ENST00000568219 ZNF670Q9BS34 389 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 EHD1Q9H4M9 534 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 PARVBQ9HBI1 364 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 RIMS3Q9UJD0 308 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 CAB39Q9Y376 341 aaPredicted RBP10.99□□□□□ -0.65
PALB2-206ENST00000568219 RNF11Q9Y3C5 154 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 ZBTB24O43167 697 aaPredicted RBP10.99□□□□□ -0.65
PALB2-206ENST00000568219 NOBOXO60393 691 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 FKBP9O95302 570 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 SNAP29O95721 258 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 COPZ1P61923 177 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 ZNF846Q147U1 533 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 FKBP9P1Q75LS8 142 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 PIWIL4Q7Z3Z4 852 aaKnown RBP10.99□□□□□ -0.65
PALB2-206ENST00000568219 NIPA2Q8N8Q9 360 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 PSD4Q8NDX1 1056 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 SLC2A14Q8TDB8 520 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 SEPT8Q92599 483 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 SLC10A4Q96EP9 437 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 CITED4Q96RK1 184 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 FTHL17Q9BXU8 183 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 SMARCAD1Q9H4L7 1026 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 RUBCNLQ9H714 662 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 OXSMQ9NWU1 459 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 TLL2Q9Y6L7 1015 aa10.99□□□□□ -0.65
PALB2-206ENST00000568219 RGL2O15211 777 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 DLX3O60479 287 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 IL7RP16871 459 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 TPSB2P20231 275 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 RABGGTBP53611 331 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 VAC14Q08AM6 782 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 SQLEQ14534 574 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 TPSAB1Q15661 275 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 MAPRE1Q15691 268 aaKnown RBP10.98□□□□□ -0.65
PALB2-206ENST00000568219 ATP6AP1LQ52LC2 224 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 IQSEC1Q6DN90 963 aa10.98□□□□□ -0.65
PALB2-206ENST00000568219 ARHGAP36Q6ZRI8 547 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms