RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 NR1I3Q14994 352 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 COL28A1Q2UY09 1125 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 HS1BP3Q53T59 392 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 ERMARDQ5T6L9 678 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 KYAT3Q6YP21 454 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 LUZP1Q86V48 1076 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 CAMK1DQ8IU85 385 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 RBFAQ8N0V3 343 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 OR4C6Q8NH72 309 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 LMX1AQ8TE12 382 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 CXorf40AQ8TE69 158 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 RAB7BQ96AH8 199 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 VCPIP1Q96JH7 1222 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 FUCA2Q9BTY2 467 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 OSBPL1AQ9BXW6 950 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 LRRC19Q9H756 370 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 CBX8Q9HC52 389 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 MBNL1Q9NR56 388 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 AIPL1Q9NZN9 384 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 MYO6Q9UM54 1294 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 MFHAS1Q9Y4C4 1052 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 AK5Q9Y6K8 562 aa12.37□□□□□ -0.43
GTF3C1-208ENST00000567843 SPTY2D1-AS1A0A0U1RR47 76 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 TTC24A2A3L6 582 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 K7ESM1 405 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 PRPSAP2O60256 369 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 BUB1BO60566 1050 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 PRAMEF11O60813 436 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 TM7SF2O76062 418 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 RNF8O76064 485 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 C1SP09871 688 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 JUNDP17535 347 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 ERCC2P18074 760 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 HNF1BP35680 557 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 IGFALSP35858 605 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 RABIFP47224 123 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 AIF1P55008 147 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 HNRNPKP61978 463 aaKnown RBP eCLIP12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 INSM1Q01101 510 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 EIF2B5Q13144 721 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 KLHL40Q2TBA0 621 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 DEFB133Q30KQ1 61 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 INO80DQ53TQ3 878 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 TDRD12Q587J7 1177 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 RFX8Q6ZV50 586 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 NYAP1Q6ZVC0 841 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 CYP4V2Q6ZWL3 525 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 PARGQ86W56 976 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 NPWQ8N729 165 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 TSEN2Q8NCE0 465 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 ZNF548Q8NEK5 533 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 CASKIN2Q8WXE0 1202 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 CRELD1Q96HD1 420 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 APOLD1Q96LR9 279 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 ZWILCHQ9H900 591 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 PDFQ9HBH1 243 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 PNMA8BQ9ULN7 279 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 GPSM3Q9Y4H4 160 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 CHD5Q8TDI0 1954 aa12.36□□□□□ -0.43
GTF3C1-208ENST00000567843 CXorf51AA0A1B0GTR3 108 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 CPED1A4D0V7 1026 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 ARHGAP42A6NI28 874 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 LRCH4O75427 683 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 PALMO75781 387 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 CSF2P04141 144 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 ALPPL2P10696 532 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 NME1P15531 152 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 ACP1P24666 158 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 PRKCIP41743 596 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 NDST2P52849 883 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 THOP1P52888 689 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 PFN3P60673 137 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 FANCCQ00597 558 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 SMTNL2Q2TAL5 461 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 CFAP58Q5T655 872 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 CRTC1Q6UUV9 634 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 ZSWIM9Q86XI8 627 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 DCP2Q8IU60 420 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 ARHGAP12Q8IWW6 846 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 PAF1Q8N7H5 531 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 HSPH1Q92598 858 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 CENPTQ96BT3 561 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 ARHGEF26Q96DR7 871 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 BTBD6Q96KE9 485 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 LENG8Q96PV6 779 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 SUV39H2Q9H5I1 410 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 SP110Q9HB58 689 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 PCDH12Q9NPG4 1184 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 GPR27Q9NS67 375 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 CWC15Q9P013 229 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 CLCA2Q9UQC9 943 aa12.35□□□□□ -0.43
GTF3C1-208ENST00000567843 COL5A1P20908 1838 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 ITPR1Q14643 2758 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 LY6G6EA0A0G2JKS1 128 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 NEMP2A6NFY4 417 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 A8MX80 341 aa12.34□□□□□ -0.43
GTF3C1-208ENST00000567843 MUSKO15146 869 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms