RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 IQCDQ96DY2 449 aa15.37■□□□□ 0.05
CMTM3-212ENST00000566121 TRIM11Q96F44 468 aa15.37■□□□□ 0.05
CMTM3-212ENST00000566121 KLHL32Q96NJ5 620 aa15.37■□□□□ 0.05
CMTM3-212ENST00000566121 TUBGCP5Q96RT8 1024 aa15.37■□□□□ 0.05
CMTM3-212ENST00000566121 ISCUQ9H1K1 167 aa15.37■□□□□ 0.05
CMTM3-212ENST00000566121 LHX6Q9UPM6 363 aa15.37■□□□□ 0.05
CMTM3-212ENST00000566121 CA5BQ9Y2D0 317 aa15.37■□□□□ 0.05
CMTM3-212ENST00000566121 ACTL7AQ9Y615 435 aa15.37■□□□□ 0.05
CMTM3-212ENST00000566121 H3BM21 787 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 RAD51BO15315 384 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 KALRNO60229 2985 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 UGT2B4P06133 528 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 CLDN2P57739 230 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 INSM1Q01101 510 aaPredicted RBP15.36■□□□□ 0.05
CMTM3-212ENST00000566121 OGDHQ02218 1023 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 TARDBPQ13148 414 aaKnown RBP eCLIP15.36■□□□□ 0.05
CMTM3-212ENST00000566121 CYTH1Q15438 398 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 ANO6Q4KMQ2 910 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 HES3Q5TGS1 186 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 BRAT1Q6PJG6 821 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 ARFGAP1Q8N6T3 406 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 TPCN2Q8NHX9 752 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 KLK6Q92876 244 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 HMCESQ96FZ2 354 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 CALN1Q9BXU9 219 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 KLC2Q9H0B6 622 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 SUV39H2Q9H5I1 410 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 MRPL47Q9HD33 250 aaKnown RBP15.36■□□□□ 0.05
CMTM3-212ENST00000566121 SEPT11Q9NVA2 429 aaKnown RBP15.36■□□□□ 0.05
CMTM3-212ENST00000566121 UCKL1Q9NWZ5 548 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 BZW2Q9Y6E2 419 aaKnown RBP15.36■□□□□ 0.05
CMTM3-212ENST00000566121 SCINQ9Y6U3 715 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 BPTFQ12830 3046 aa15.36■□□□□ 0.05
CMTM3-212ENST00000566121 PTPRQQ9UMZ3 2332 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 LY6G6EA0A0G2JKS1 128 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 ARHGAP42A6NI28 874 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 K7ESM1 405 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 TM7SF2O76062 418 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 RNF8O76064 485 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 FTLP02792 175 aaPredicted RBP15.35■□□□□ 0.05
CMTM3-212ENST00000566121 ZNF165P49910 485 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 RHOAP61586 193 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
CMTM3-212ENST00000566121 IQCB1Q15051 598 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 BOLA3Q53S33 107 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 ZCCHC8Q6NZY4 707 aaKnown RBP15.35■□□□□ 0.05
CMTM3-212ENST00000566121 IGF2-ASQ6U949 168 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 ZNF571Q7Z3V5 609 aaPredicted RBP15.35■□□□□ 0.05
CMTM3-212ENST00000566121 ZNF599Q96NL3 588 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 FUCA2Q9BTY2 467 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 HAUS4Q9H6D7 363 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 FZD3Q9NPG1 666 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 TAS2R14Q9NYV8 317 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 LHX3Q9UBR4 397 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 UBA2Q9UBT2 640 aaPredicted RBP15.35■□□□□ 0.05
CMTM3-212ENST00000566121 AP4E1Q9UPM8 1137 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 CLCA2Q9UQC9 943 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 RAXQ9Y2V3 346 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 U3KQA8 63 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 ADAMTS20P59510 1910 aa15.35■□□□□ 0.05
CMTM3-212ENST00000566121 A0A1W2PQJ5 194 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 FAM149AA5PLN7 773 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 LRRC53A6NM62 1247 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 NEMP1O14524 444 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 CREB3O43889 395 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 DXOO77932 396 aaKnown RBP15.34■□□□□ 0.05
CMTM3-212ENST00000566121 HOXC4P09017 264 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-212ENST00000566121 PSMA2P25787 234 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 GKP32189 559 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 TPI1P60174 286 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 UGP2Q16851 508 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 ATXN7L2Q5T6C5 722 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-212ENST00000566121 LVRNQ6Q4G3 990 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 CYP4V2Q6ZWL3 525 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-212ENST00000566121 PTAR1Q7Z6K3 402 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-212ENST00000566121 LSMEM2Q8N112 164 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 RYBPQ8N488 228 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-212ENST00000566121 ZNF548Q8NEK5 533 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-212ENST00000566121 SNIP1Q8TAD8 396 aaKnown RBP15.34■□□□□ 0.05
CMTM3-212ENST00000566121 WDR48Q8TAF3 677 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 ECHDC3Q96DC8 303 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 APOLD1Q96LR9 279 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 DNAJC28Q9NX36 388 aa15.34■□□□□ 0.05
CMTM3-212ENST00000566121 A0A1W2PQ67 120 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 EME2A4GXA9 379 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-212ENST00000566121 LMO7DNF2Z398 122 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 DDX3XO00571 662 aaKnown RBP eCLIP15.33■□□□□ 0.04
CMTM3-212ENST00000566121 AQP9O43315 295 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 OPA1O60313 960 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 SDC3O75056 442 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 MT-CO3P00414 261 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 BLKP51451 505 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 POLR2LP62875 67 aaKnown RBP15.33■□□□□ 0.04
CMTM3-212ENST00000566121 IL10RBQ08334 325 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 EIF2B5Q13144 721 aaKnown RBP15.33■□□□□ 0.04
CMTM3-212ENST00000566121 PDE1CQ14123 709 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-212ENST00000566121 ASIC2Q16515 512 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 DPYSL2Q16555 572 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 MACC1Q6ZN28 852 aa15.33■□□□□ 0.04
CMTM3-212ENST00000566121 RFX8Q6ZV50 586 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms