RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 TTPAP49638 278 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 MAPKAPK3Q16644 382 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 NOMO2Q5JPE7 1267 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 PAGE2Q7Z2X7 111 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 FIBCD1Q8N539 461 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 IPCEF1Q8WWN9 437 aaPredicted RBP13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 MYLPFQ96A32 169 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 C18orf25Q96B23 403 aaPredicted RBP13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 RPL38P63173 70 aaKnown RBP13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 PTPRNQ16849 979 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 ZIK1Q3SY52 487 aaPredicted RBP13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 EXOC2Q96KP1 924 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 SPATA5L1Q9BVQ7 753 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 ABCG8Q9H221 673 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 MMADHCQ9H3L0 296 aaPredicted RBP13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 KCNK4Q9NYG8 393 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 NEURL4Q96JN8 1562 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 A0A087WXM4 84 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 TCRBV5S4A2TA0A5A2 114 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 URADA6NGE7 173 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 PDE2AO00408 941 aaPredicted RBP13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 SCN2BO60939 215 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 FTH1P02794 183 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 TFEBP19484 476 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 CCNA2P20248 432 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 GRIA3P42263 894 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 CASP7P55210 303 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 MYBPC1Q00872 1141 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 MAMLD1Q13495 774 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 KCTD21Q4G0X4 260 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 FAM124AQ86V42 546 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 CLN6Q9NWW5 311 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 BTBD7Q9P203 1132 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 PTGFRNQ9P2B2 879 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 RPS6KA6Q9UK32 745 aa13.71□□□□□ -0.21
CX3CL1-204ENST00000565912 RGS1Q08116 209 aa13.71□□□□□ -0.22
CX3CL1-204ENST00000565912 TIMM50Q3ZCQ8 353 aa13.71□□□□□ -0.22
CX3CL1-204ENST00000565912 POLNQ7Z5Q5 900 aa13.71□□□□□ -0.22
CX3CL1-204ENST00000565912 ZFPM1Q8IX07 1006 aa13.71□□□□□ -0.22
CX3CL1-204ENST00000565912 PRDM16Q9HAZ2 1276 aa13.71□□□□□ -0.22
CX3CL1-204ENST00000565912 GNRH1P01148 92 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 CSH1P0DML2 217 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 CSH2P0DML3 217 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 STAT5AP42229 794 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 PPP3CAQ08209 521 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 BHLHB9Q6PI77 547 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 KBTBD2Q8IY47 623 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 CDYL2Q8N8U2 506 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 CERS2Q96G23 380 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 SNRNP25Q9BV90 132 aaKnown RBP13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 TNFRSF21O75509 655 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 FARP2O94887 1054 aaPredicted RBP13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 MLYCDO95822 493 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 GLRA2P23416 452 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 ZNF143P52747 638 aaPredicted RBP13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 PIGZQ86VD9 579 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 ACP6Q9NPH0 428 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 TMPRSS4Q9NRS4 437 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 TMCO1Q9UM00 188 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 CLCN5P51795 746 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 MAXP61244 160 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 ZNF549Q6P9A3 640 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 RASAL3Q86YV0 1011 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 HIPK1Q86Z02 1210 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 ULK2Q8IYT8 1036 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 SLC38A2Q96QD8 506 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 BLOC1S4Q9NUP1 217 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 TAS2R14Q9NYV8 317 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 MAPRE3Q9UPY8 281 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 MAGEC1O60732 1142 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 ZMPSTE24O75844 475 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 ATP5F1P24539 256 aaPredicted RBP13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 CREMQ03060 361 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 GALNT3Q14435 633 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 LRRN4Q8WUT4 740 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 UBAP1Q9NZ09 502 aa13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 RBM7Q9Y580 266 aaKnown RBP13.7□□□□□ -0.22
CX3CL1-204ENST00000565912 FAM237BA0A1B0GVD1 139 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 WWP2O00308 870 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 SNRPB2P08579 225 aaKnown RBP13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 GRIA4P48058 902 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 TBX2Q13207 712 aaPredicted RBP13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 USP41Q3LFD5 358 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 KCNK18Q7Z418 384 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 RBM23Q86U06 439 aaKnown RBP13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 NELL1Q92832 810 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 PPP3R2Q96LZ3 170 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 GDF3Q9NR23 364 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 LRCH1Q9Y2L9 728 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 GMPPBQ9Y5P6 360 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 CARNS1A5YM72 827 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 HMGB3O15347 200 aaKnown RBP13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 SLC35G4P0C7Q5 338 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 SQLEQ14534 574 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 USP50Q70EL3 339 aaPredicted RBP13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 CDH24Q86UP0 819 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 HJURPQ8NCD3 748 aaPredicted RBP13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 BRD9Q9H8M2 597 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 SAR1AQ9NR31 198 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms