RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ZFR2Q9UPR6 939 aaKnown RBP16.94■□□□□ 0.3
USB1-211ENST00000565662 TMEM110-MUSTN1A8MSY1 372 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 PRLRP16471 622 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 BLKP51451 505 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 DUSP3P51452 185 aaPredicted RBP16.93■□□□□ 0.3
USB1-211ENST00000565662 DPYSQ14117 519 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 SLC18A3Q16572 532 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 CCDC122Q5T0U0 273 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 GCNT7Q6ZNI0 430 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 CNGA4Q8IV77 575 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 CHCHD4Q8N4Q1 142 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 OR8K1Q8NGG5 319 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 SPOCK2Q92563 424 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 SUV39H2Q9H5I1 410 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.93■□□□□ 0.3
USB1-211ENST00000565662 IPO11Q9UI26 975 aaKnown RBP16.93■□□□□ 0.3
USB1-211ENST00000565662 BTBD3Q9Y2F9 522 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 CSNK1G3Q9Y6M4 447 aa16.93■□□□□ 0.3
USB1-211ENST00000565662 CHD8Q9HCK8 2581 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 CEP295Q9C0D2 2601 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 KRT7P08729 469 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 KRT10P13645 584 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 CKMT2P17540 419 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 CASP14P31944 242 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 PAPOLAP51003 745 aaKnown RBP16.92■□□□□ 0.3
USB1-211ENST00000565662 THOP1P52888 689 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 CDH6P55285 790 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 IL9RQ01113 521 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 ZNF211Q13398 564 aaPredicted RBP16.92■□□□□ 0.3
USB1-211ENST00000565662 ZNF235Q14590 738 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 AGERQ15109 404 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 SMAD1Q15797 465 aaKnown RBP16.92■□□□□ 0.3
USB1-211ENST00000565662 ATXN7L2Q5T6C5 722 aaPredicted RBP16.92■□□□□ 0.3
USB1-211ENST00000565662 SEL1L3Q68CR1 1132 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 CCNI2Q6ZMN8 369 aaPredicted RBP16.92■□□□□ 0.3
USB1-211ENST00000565662 SPATS2Q86XZ4 545 aaKnown RBP16.92■□□□□ 0.3
USB1-211ENST00000565662 CACTIN-AS1Q8N1I8 211 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 ATPAF2Q8N5M1 289 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 PAF1Q8N7H5 531 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 OR13H1Q8NG92 308 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 OR6K2Q8NGY2 324 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 ZNF564Q8TBZ8 553 aaPredicted RBP16.92■□□□□ 0.3
USB1-211ENST00000565662 CPLX3Q8WVH0 158 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 PSKH2Q96QS6 385 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 PEBP4Q96S96 227 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 DNAJC7Q99615 494 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 XPO4Q9C0E2 1151 aaKnown RBP16.92■□□□□ 0.3
USB1-211ENST00000565662 THAP2Q9H0W7 228 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 GPATCH2LQ9NWQ4 482 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 TOR4AQ9NXH8 423 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 NLGN3Q9NZ94 848 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 LHX3Q9UBR4 397 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 AMACRQ9UHK6 382 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 KLK13Q9UKR3 277 aa16.92■□□□□ 0.3
USB1-211ENST00000565662 A0A087X0T9 212 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 SPTY2D1-AS1A0A0U1RR47 76 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 DFFAO00273 331 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 WNT9AO14904 365 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 SOCS5O75159 536 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 PAK4O96013 591 aaPredicted RBP16.91■□□□□ 0.3
USB1-211ENST00000565662 FAM228BP0C875 321 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 MAN1A1P33908 653 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 ABL2P42684 1182 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 PEX5P50542 639 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 E2F1Q01094 437 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 BCL2L1Q07817 233 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 KRT81Q14533 505 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 PDK2Q15119 407 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 SHBQ15464 509 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 UGP2Q16851 508 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 TMEM52BQ4KMG9 183 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 Q6ZSR6 202 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 CYP4V2Q6ZWL3 525 aaPredicted RBP16.91■□□□□ 0.3
USB1-211ENST00000565662 POLNQ7Z5Q5 900 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 SDR16C5Q8N3Y7 309 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 ARFGAP1Q8N6T3 406 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 OR4C6Q8NH72 309 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 ZCCHC14Q8WYQ9 949 aaKnown RBP16.91■□□□□ 0.3
USB1-211ENST00000565662 ZNF670Q9BS34 389 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 TMEM121BQ9BXQ6 578 aaPredicted RBP16.91■□□□□ 0.3
USB1-211ENST00000565662 SLC39A8Q9C0K1 460 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 CWC15Q9P013 229 aaKnown RBP16.91■□□□□ 0.3
USB1-211ENST00000565662 DKK4Q9UBT3 224 aa16.91■□□□□ 0.3
USB1-211ENST00000565662 EPG5Q9HCE0 2579 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 KCNK3O14649 394 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 PIAS2O75928 621 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 CSF2P04141 144 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 ATXN1LP0C7T5 689 aaKnown RBP16.9■□□□□ 0.3
USB1-211ENST00000565662 NME1P15531 152 aaKnown RBP16.9■□□□□ 0.3
USB1-211ENST00000565662 CES1P23141 567 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 ACP1P24666 158 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 HTR1BP28222 390 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 LBRQ14739 615 aaKnown RBP16.9■□□□□ 0.3
USB1-211ENST00000565662 CYTH1Q15438 398 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 CA9Q16790 459 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 TIGD7Q6NT04 549 aaPredicted RBP16.9■□□□□ 0.3
USB1-211ENST00000565662 KANSL1Q7Z3B3 1105 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 SRLQ86TD4 932 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 SLCO6A1Q86UG4 719 aa16.9■□□□□ 0.3
USB1-211ENST00000565662 VSIG1Q86XK7 387 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms