RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 ARHGEF2Q92974 986 aaKnown RBP19.21■□□□□ 0.67
SPSB3-207ENST00000565550 ISG20Q96AZ6 181 aaKnown RBP19.21■□□□□ 0.67
SPSB3-207ENST00000565550 TRIM11Q96F44 468 aa19.21■□□□□ 0.67
SPSB3-207ENST00000565550 IFT43Q96FT9 208 aa19.21■□□□□ 0.67
SPSB3-207ENST00000565550 BBC3Q96PG8 261 aaPredicted RBP19.21■□□□□ 0.67
SPSB3-207ENST00000565550 NUP85Q9BW27 656 aa19.21■□□□□ 0.67
SPSB3-207ENST00000565550 DNAJC28Q9NX36 388 aa19.21■□□□□ 0.67
SPSB3-207ENST00000565550 ASXL3Q9C0F0 2248 aa19.21■□□□□ 0.67
SPSB3-207ENST00000565550 AP1G1O43747 822 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 LRIG2O94898 1065 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 MT-CO3P00414 261 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 CYP1A2P05177 515 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 MYBL1P10243 752 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 MYF5P13349 255 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 ETFBP38117 255 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 MAPKAPK2P49137 400 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 TSR1Q2NL82 804 aaKnown RBP19.2■□□□□ 0.66
SPSB3-207ENST00000565550 KDM7AQ6ZMT4 941 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 LEKR1Q6ZMV7 388 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 SPC24Q8NBT2 197 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 GPR27Q9NS67 375 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 TMEM248Q9NWD8 314 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 PCSK1NQ9UHG2 260 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 NEU3Q9UQ49 428 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 SCINQ9Y6U3 715 aa19.2■□□□□ 0.66
SPSB3-207ENST00000565550 CXorf51AA0A1B0GTR3 108 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 NEMP2A6NFY4 417 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 IGLON5A6NGN9 336 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 C16orf96A6NNT2 1141 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 NEBLO76041 1014 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 ALPPL2P10696 532 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 CKMT1AP12532 417 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 ABL2P42684 1182 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 SGCGQ13326 291 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 FZD2Q14332 565 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 CA9Q16790 459 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 KYAT3Q6YP21 454 aaKnown RBP19.19■□□□□ 0.66
SPSB3-207ENST00000565550 CYP4V2Q6ZWL3 525 aaPredicted RBP19.19■□□□□ 0.66
SPSB3-207ENST00000565550 SLFN11Q7Z7L1 901 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 APOLD1Q96LR9 279 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 C1QTNF2Q9BXJ5 285 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 MAGEH1Q9H213 219 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 RETREG1Q9H6L5 497 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 NLGN3Q9NZ94 848 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 FZD10Q9ULW2 581 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 HPCAL4Q9UM19 191 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 BAHCC1Q9P281 2608 aa19.19■□□□□ 0.66
SPSB3-207ENST00000565550 LOC400499M0QZD8 3231 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 SPTY2D1-AS1A0A0U1RR47 76 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 K7ESM1 405 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 KRIT1O00522 736 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 SCAMP1O15126 338 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 TSPAN6O43657 245 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 BRINP1O60477 761 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 GEMIN4P57678 1058 aaKnown RBP19.18■□□□□ 0.66
SPSB3-207ENST00000565550 HNRNPKP61978 463 aaKnown RBP eCLIP19.18■□□□□ 0.66
SPSB3-207ENST00000565550 POLD3Q15054 466 aaPredicted RBP19.18■□□□□ 0.66
SPSB3-207ENST00000565550 MYLK3Q32MK0 819 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 ZNF805Q5CZA5 627 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 LRRC69Q6ZNQ3 347 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 OR2AP1Q8NGE2 309 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 NTAN1Q96AB6 310 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 RAB7BQ96AH8 199 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 VOPP1Q96AW1 172 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 TBC1D31Q96DN5 1066 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 CCDC42Q96M95 316 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 LENG8Q96PV6 779 aaPredicted RBP19.18■□□□□ 0.66
SPSB3-207ENST00000565550 KLF6Q99612 283 aaPredicted RBP19.18■□□□□ 0.66
SPSB3-207ENST00000565550 MRPL47Q9HD33 250 aaKnown RBP19.18■□□□□ 0.66
SPSB3-207ENST00000565550 IPO11Q9UI26 975 aaKnown RBP19.18■□□□□ 0.66
SPSB3-207ENST00000565550 GGT7Q9UJ14 662 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 ANAPC7Q9UJX3 599 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 TFR2Q9UP52 801 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 ITM2BQ9Y287 266 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 TRPM6Q9BX84 2022 aa19.18■□□□□ 0.66
SPSB3-207ENST00000565550 NEMP1O14524 444 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 FPGTO14772 594 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 RRP8O43159 456 aaKnown RBP19.17■□□□□ 0.66
SPSB3-207ENST00000565550 OPA1O60313 960 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 RAMP2O60895 175 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 LRCH4O75427 683 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 POP4O95707 220 aaKnown RBP19.17■□□□□ 0.66
SPSB3-207ENST00000565550 GSRP00390 522 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 CSF2P04141 144 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 UGT2B4P06133 528 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 MIPP30301 263 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 RABIFP47224 123 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 SNRPD1P62314 119 aaKnown RBP19.17■□□□□ 0.66
SPSB3-207ENST00000565550 TXNRD3NBQ6F5E7 133 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 ZSCAN30Q86W11 494 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 FAM181AQ8N9Y4 354 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 FGF11Q92914 225 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 KLHL32Q96NJ5 620 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 SNRNP25Q9BV90 132 aaKnown RBP19.17■□□□□ 0.66
SPSB3-207ENST00000565550 DUSP23Q9BVJ7 150 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 PCDHB1Q9Y5F3 818 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 MYLKQ15746 1914 aa19.17■□□□□ 0.66
SPSB3-207ENST00000565550 TDRD6O60522 2096 aaKnown RBP19.16■□□□□ 0.66
SPSB3-207ENST00000565550 FASNP49327 2511 aaKnown RBP19.16■□□□□ 0.66
SPSB3-207ENST00000565550 LY6G6EA0A0G2JKS1 128 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms