RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 DCUN1D2Q6PH85 259 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 NYAP1Q6ZVC0 841 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 VPS36Q86VN1 386 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 PARGQ86W56 976 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 DENND6BQ8NEG7 585 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 ASB12Q8WXK4 309 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 DCBLD2Q96PD2 775 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 KCTD15Q96SI1 283 aaPredicted RBP24.04■■□□□ 1.44
RAB40C-209ENST00000565511 CLCA2Q9UQC9 943 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 MBD3O95983 291 aa24.03■■□□□ 1.44
RAB40C-209ENST00000565511 MT-CO3P00414 261 aa24.03■■□□□ 1.44
RAB40C-209ENST00000565511 TNFAIP3P21580 790 aa24.03■■□□□ 1.44
RAB40C-209ENST00000565511 ITPKBP27987 946 aa24.03■■□□□ 1.44
RAB40C-209ENST00000565511 RGRP47804 291 aa24.03■■□□□ 1.44
RAB40C-209ENST00000565511 YBEYP58557 167 aaPredicted RBP24.03■■□□□ 1.44
RAB40C-209ENST00000565511 PARP15Q460N3 678 aa24.03■■□□□ 1.44
RAB40C-209ENST00000565511 SOWAHCQ53LP3 525 aaPredicted RBP24.03■■□□□ 1.44
RAB40C-209ENST00000565511 INO80DQ53TQ3 878 aaPredicted RBP24.03■■□□□ 1.44
RAB40C-209ENST00000565511 ZNF571Q7Z3V5 609 aaPredicted RBP24.03■■□□□ 1.44
RAB40C-209ENST00000565511 TTC7BQ86TV6 843 aa24.03■■□□□ 1.44
RAB40C-209ENST00000565511 ZSWIM9Q86XI8 627 aa24.03■■□□□ 1.44
RAB40C-209ENST00000565511 DCP2Q8IU60 420 aaKnown RBP24.03■■□□□ 1.44
RAB40C-209ENST00000565511 TP53I13Q8NBR0 393 aaPredicted RBP24.03■■□□□ 1.44
RAB40C-209ENST00000565511 FAM174AQ8TBP5 190 aa24.03■■□□□ 1.44
RAB40C-209ENST00000565511 BBC3Q96PG8 261 aaPredicted RBP24.03■■□□□ 1.44
RAB40C-209ENST00000565511 WRAP53Q9BUR4 548 aaKnown RBP24.03■■□□□ 1.44
RAB40C-209ENST00000565511 NRSN2Q9GZP1 204 aa24.03■■□□□ 1.44
RAB40C-209ENST00000565511 AP4E1Q9UPM8 1137 aa24.03■■□□□ 1.44
RAB40C-209ENST00000565511 COQ6Q9Y2Z9 468 aa24.03■■□□□ 1.44
RAB40C-209ENST00000565511 MFHAS1Q9Y4C4 1052 aa24.03■■□□□ 1.44
RAB40C-209ENST00000565511 ANKRD62A6NC57 917 aa24.02■■□□□ 1.44
RAB40C-209ENST00000565511 CASC3O15234 703 aaKnown RBP24.02■■□□□ 1.44
RAB40C-209ENST00000565511 BRINP1O60477 761 aa24.02■■□□□ 1.44
RAB40C-209ENST00000565511 PSMA2P25787 234 aa24.02■■□□□ 1.44
RAB40C-209ENST00000565511 TPI1P60174 286 aa24.02■■□□□ 1.44
RAB40C-209ENST00000565511 HNRNPKP61978 463 aaKnown RBP eCLIP24.02■■□□□ 1.44
RAB40C-209ENST00000565511 COL9A2Q14055 689 aaPredicted RBP24.02■■□□□ 1.44
RAB40C-209ENST00000565511 CDCP2Q5VXM1 449 aa24.02■■□□□ 1.44
RAB40C-209ENST00000565511 CASKIN2Q8WXE0 1202 aa24.02■■□□□ 1.44
RAB40C-209ENST00000565511 SNRNP25Q9BV90 132 aaKnown RBP24.02■■□□□ 1.44
RAB40C-209ENST00000565511 CATSPERBQ9H7T0 1116 aa24.02■■□□□ 1.44
RAB40C-209ENST00000565511 UBA2Q9UBT2 640 aaPredicted RBP24.02■■□□□ 1.44
RAB40C-209ENST00000565511 PCSK1NQ9UHG2 260 aa24.02■■□□□ 1.44
RAB40C-209ENST00000565511 AK5Q9Y6K8 562 aa24.02■■□□□ 1.44
RAB40C-209ENST00000565511 GOLGA6L22H0YM25 854 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 FGF10O15520 208 aaPredicted RBP24.01■■□□□ 1.43
RAB40C-209ENST00000565511 OPA1O60313 960 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 BUB1BO60566 1050 aaPredicted RBP24.01■■□□□ 1.43
RAB40C-209ENST00000565511 PRKCGP05129 697 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 JUNDP17535 347 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 AIF1P55008 147 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 DEFB133Q30KQ1 61 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 ARHGAP36Q6ZRI8 547 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 ZSCAN30Q86W11 494 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 ARHGAP12Q8IWW6 846 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 TP53INP2Q8IXH6 220 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 CACTIN-AS1Q8N1I8 211 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 NPWQ8N729 165 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 FAM181AQ8N9Y4 354 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 NSMCE3Q96MG7 304 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 NAP1L5Q96NT1 182 aaPredicted RBP24.01■■□□□ 1.43
RAB40C-209ENST00000565511 SLC39A8Q9C0K1 460 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 DHX35Q9H5Z1 703 aaKnown RBP24.01■■□□□ 1.43
RAB40C-209ENST00000565511 HAUS4Q9H6D7 363 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 DKK3Q9UBP4 350 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 MYO6Q9UM54 1294 aa24.01■■□□□ 1.43
RAB40C-209ENST00000565511 TSPAN11A1L157 253 aa24■■□□□ 1.43
RAB40C-209ENST00000565511 DDX3XO00571 662 aaKnown RBP eCLIP24■■□□□ 1.432e-7■■■■■ 28.9
RAB40C-209ENST00000565511 PRAMEF11O60813 436 aa24■■□□□ 1.43
RAB40C-209ENST00000565511 GCATO75600 419 aa24■■□□□ 1.43
RAB40C-209ENST00000565511 CELA2BP08218 269 aaPredicted RBP24■■□□□ 1.43
RAB40C-209ENST00000565511 IRF4Q15306 451 aa24■■□□□ 1.43
RAB40C-209ENST00000565511 ASIC2Q16515 512 aa24■■□□□ 1.43
RAB40C-209ENST00000565511 KIF26BQ2KJY2 2108 aa24■■□□□ 1.43
RAB40C-209ENST00000565511 KLHL40Q2TBA0 621 aa24■■□□□ 1.43
RAB40C-209ENST00000565511 LMX1AQ8TE12 382 aa24■■□□□ 1.43
RAB40C-209ENST00000565511 BPIFA3Q9BQP9 254 aa24■■□□□ 1.43
RAB40C-209ENST00000565511 IPO11Q9UI26 975 aaKnown RBP24■■□□□ 1.43
RAB40C-209ENST00000565511 TMEM191CA6NGB0 347 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 EEF2KO00418 725 aaKnown RBP23.99■■□□□ 1.43
RAB40C-209ENST00000565511 AQP9O43315 295 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 ALPPL2P10696 532 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 EIF2S3P41091 472 aaKnown RBP23.99■■□□□ 1.43
RAB40C-209ENST00000565511 PAPOLAP51003 745 aaKnown RBP23.99■■□□□ 1.43
RAB40C-209ENST00000565511 E2F1Q01094 437 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 C1orf61Q13536 156 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 CDKN3Q16667 212 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 TMEM52BQ4KMG9 183 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 HS1BP3Q53T59 392 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 AFMIDQ63HM1 303 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 GUSBP11Q6P575 273 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 IFI44Q8TCB0 444 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 CXorf40AQ8TE69 158 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 VCPIP1Q96JH7 1222 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 LRRC61Q9BV99 259 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 CPEB1Q9BZB8 566 aaKnown RBP23.99■■□□□ 1.43
RAB40C-209ENST00000565511 PCDH12Q9NPG4 1184 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 PARVAQ9NVD7 372 aa23.99■■□□□ 1.43
RAB40C-209ENST00000565511 BPTFQ12830 3046 aa23.98■■□□□ 1.43
RAB40C-209ENST00000565511 TM7SF2O76062 418 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms