RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 NANOGP1Q8N7R0 232 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 KDM1BQ8NB78 822 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 CEP76Q8TAP6 659 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 TMEM170AQ8WVE7 144 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 COQ8BQ96D53 544 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 MARK4Q96L34 752 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 YME1L1Q96TA2 773 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 PLEKHA5Q9HAU0 1116 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 SEL1LQ9UBV2 794 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 PCDHA12Q9UN75 941 aa4.69□□□□□ -1.66
CHD9-215ENST00000565442 TMEM272A0A1B0GTI8 110 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.68□□□□□ -1.66
CHD9-215ENST00000565442 TYW5A2RUC4 315 aaKnown RBP4.68□□□□□ -1.66
CHD9-215ENST00000565442 PRSS47A8MTI9 375 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 SOCS2O14508 198 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 ATP2C2O75185 946 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 RNASEH2AO75792 299 aaKnown RBP4.68□□□□□ -1.66
CHD9-215ENST00000565442 NDUFB8O95169 186 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 CLDN7O95471 211 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 HEXAP06865 529 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 CTPS1P17812 591 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 MAPK4P31152 587 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 TTKP33981 857 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 CPOXP36551 454 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 GPR12P47775 334 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 GNAQP50148 359 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 RARSP54136 660 aaKnown RBP4.68□□□□□ -1.66
CHD9-215ENST00000565442 CLDN2P57739 230 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 TMEM115Q12893 351 aaPredicted RBP4.68□□□□□ -1.66
CHD9-215ENST00000565442 CAPSQ13938 189 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 PPP2R5BQ15173 497 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 RBMS2Q15434 407 aaKnown RBP4.68□□□□□ -1.66
CHD9-215ENST00000565442 SNX30Q5VWJ9 437 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 ATG9BQ674R7 924 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 LRRC8EQ6NSJ5 796 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 CES5AQ6NT32 575 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 PXKQ7Z7A4 578 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 TDRPQ86YL5 185 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 ZDHHC23Q8IYP9 409 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 NGEFQ8N5V2 710 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 C16orf52Q8NHV5 167 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 NSMCE1Q8WV22 266 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 PERPQ96FX8 193 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 ZFYVE19Q96K21 471 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 POLDIP3Q9BY77 421 aaKnown RBP4.68□□□□□ -1.66
CHD9-215ENST00000565442 MVB12BQ9H7P6 319 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 TBC1D22BQ9NU19 505 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 FBXO9Q9UK97 447 aaPredicted RBP4.68□□□□□ -1.66
CHD9-215ENST00000565442 MKLN1Q9UL63 735 aa4.68□□□□□ -1.66
CHD9-215ENST00000565442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.68□□□□□ -1.66
CHD9-215ENST00000565442 EBAG9O00559 213 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 ZBED4O75132 1171 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 ZC3H11AO75152 810 aaKnown RBP eCLIP4.67□□□□□ -1.66
CHD9-215ENST00000565442 SEC14L2O76054 403 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 FGBP02675 491 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 PRF1P14222 555 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 PTPN2P17706 415 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 RYKP34925 604 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 AVPR1AP37288 418 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 PPP3CCP48454 512 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 CENPAP49450 140 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 RPL7AP62424 266 aaKnown RBP4.67□□□□□ -1.66
CHD9-215ENST00000565442 RNPS1Q15287 305 aaKnown RBP4.67□□□□□ -1.66
CHD9-215ENST00000565442 MED22Q15528 200 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 ITPRIPL1Q6GPH6 555 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 MZT2BQ6NZ67 158 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 CDC73Q6P1J9 531 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 CLEC4GQ6UXB4 293 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 NEK10Q6ZWH5 1172 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 PIP4P1Q86T03 277 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 CAMK1DQ8IU85 385 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 DHX40Q8IX18 779 aaKnown RBP4.67□□□□□ -1.66
CHD9-215ENST00000565442 ZNF548Q8NEK5 533 aaPredicted RBP4.67□□□□□ -1.66
CHD9-215ENST00000565442 ZMIZ2Q8NF64 920 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 RNF183Q96D59 192 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 ZC3HAV1LQ96H79 300 aaKnown RBP4.67□□□□□ -1.66
CHD9-215ENST00000565442 ZNF333Q96JL9 665 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 BBS4Q96RK4 519 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 WDR77Q9BQA1 342 aaPredicted RBP4.67□□□□□ -1.66
CHD9-215ENST00000565442 H2AFJQ9BTM1 129 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 TRMOQ9BU70 441 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 ITPAQ9BY32 194 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 TASP1Q9H6P5 420 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 DIAPH3Q9NSV4 1193 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 DECR2Q9NUI1 292 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 SPATS2LQ9NUQ6 558 aaKnown RBP4.67□□□□□ -1.66
CHD9-215ENST00000565442 ZNF112Q9UJU3 913 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 INTS6Q9UL03 887 aaKnown RBP4.67□□□□□ -1.66
CHD9-215ENST00000565442 A4GNTQ9UNA3 340 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 FAM96BQ9Y3D0 163 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 CAPN7Q9Y6W3 813 aa4.67□□□□□ -1.66
CHD9-215ENST00000565442 FSD2A1L4K1 749 aa4.66□□□□□ -1.66
CHD9-215ENST00000565442 LRRC53A6NM62 1247 aa4.66□□□□□ -1.66
CHD9-215ENST00000565442 HSPB2A8KAH6 182 aa4.66□□□□□ -1.66
CHD9-215ENST00000565442 KLRF2D3W0D1 207 aa4.66□□□□□ -1.66
CHD9-215ENST00000565442 MDM4O15151 490 aa4.66□□□□□ -1.66
CHD9-215ENST00000565442 IRF1P10914 325 aa4.66□□□□□ -1.66
CHD9-215ENST00000565442 ENO3P13929 434 aaPredicted RBP4.66□□□□□ -1.66
CHD9-215ENST00000565442 ZNF8P17098 575 aaPredicted RBP4.66□□□□□ -1.66
CHD9-215ENST00000565442 CHRNB2P17787 502 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms