RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 GOLGA8DPQ0D2H9 430 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 INPP5JQ15735 1006 aaPredicted RBP4.91□□□□□ -1.62
LINC00560-201ENST00000564593 MEA1Q16626 185 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 C10orf25Q5T742 122 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 ASPHD1Q5U4P2 390 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 CES5AQ6NT32 575 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 CAMK1DQ8IU85 385 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 DNAJC10Q8IXB1 793 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 CCDC105Q8IYK2 499 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 FRMD1Q8N878 549 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 TMEM116Q8NCL8 245 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 MCPH1Q8NEM0 835 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 CEP76Q8TAP6 659 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 GTF3C6Q969F1 213 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 FAM149B1Q96BN6 582 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 ZC3HAV1LQ96H79 300 aaKnown RBP4.91□□□□□ -1.62
LINC00560-201ENST00000564593 CRAMP1Q96RY5 1269 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 YME1L1Q96TA2 773 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 GHITMQ9H3K2 345 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 TASP1Q9H6P5 420 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 HCFC1R1Q9NWW0 138 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 EHD2Q9NZN4 543 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 ZNF70Q9UC06 446 aaPredicted RBP4.91□□□□□ -1.62
LINC00560-201ENST00000564593 CORO1CQ9ULV4 474 aaPredicted RBP4.91□□□□□ -1.62
LINC00560-201ENST00000564593 LYVE1Q9Y5Y7 322 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 A6NCN8 305 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 KLRF2D3W0D1 207 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 USP17L23D6RBM5 183 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 LIASO43766 372 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 HNRNPCL1O60812 293 aaKnown RBP4.91□□□□□ -1.62
LINC00560-201ENST00000564593 ATG13O75143 517 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 ATP2C2O75185 946 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 MLYCDO95822 493 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 EIF2S1P05198 315 aaKnown RBP4.91□□□□□ -1.62
LINC00560-201ENST00000564593 MMP3P08254 477 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 ENO3P13929 434 aaPredicted RBP4.91□□□□□ -1.62
LINC00560-201ENST00000564593 CAPSQ13938 189 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 FRG1Q14331 258 aaKnown RBP4.91□□□□□ -1.62
LINC00560-201ENST00000564593 EZH2Q15910 746 aaKnown RBP4.91□□□□□ -1.62
LINC00560-201ENST00000564593 DPCR1Q3MIW9 517 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 PLEKHO1Q53GL0 409 aaPredicted RBP4.91□□□□□ -1.62
LINC00560-201ENST00000564593 MTX3Q5HYI7 312 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 HEPHL1Q6MZM0 1159 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 TTI2Q6NXR4 508 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 TMEM71Q6P5X7 295 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 GSTA5Q7RTV2 222 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 TDRPQ86YL5 185 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 DHX40Q8IX18 779 aaKnown RBP4.91□□□□□ -1.62
LINC00560-201ENST00000564593 ARHGEF2Q92974 986 aaKnown RBP4.91□□□□□ -1.62
LINC00560-201ENST00000564593 COQ8BQ96D53 544 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 ZFYVE19Q96K21 471 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 SIN3AQ96ST3 1273 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 MAP7D2Q96T17 732 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 MVB12BQ9H7P6 319 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 MAP6D1Q9H9H5 199 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 SLCO3A1Q9UIG8 710 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 HAO1Q9UJM8 370 aa4.91□□□□□ -1.62
LINC00560-201ENST00000564593 LIPT2A6NK58 231 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 HSPB2A8KAH6 182 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 NPIPB11E5RHQ5 1161 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 TAF4O00268 1085 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 MT-CYBP00156 380 aaPredicted RBP4.9□□□□□ -1.63
LINC00560-201ENST00000564593 TFPIP10646 304 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 SRD5A1P18405 259 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 PPARGP37231 505 aaPredicted RBP4.9□□□□□ -1.63
LINC00560-201ENST00000564593 AVPR1AP37288 418 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 MMP13P45452 471 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 HDAC4P56524 1084 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 HSPB2Q16082 182 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 ZKSCAN2Q63HK3 967 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 ZNF626Q68DY1 528 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 LRRC8EQ6NSJ5 796 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 NCEH1Q6PIU2 408 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 TSSK4Q6SA08 328 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 CYP20A1Q6UW02 462 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 ZCCHC9Q8N567 271 aaKnown RBP4.9□□□□□ -1.63
LINC00560-201ENST00000564593 TTC39CQ8N584 583 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 PSPC1Q8WXF1 523 aaKnown RBP4.9□□□□□ -1.63
LINC00560-201ENST00000564593 PABPC5Q96DU9 382 aaKnown RBP4.9□□□□□ -1.63
LINC00560-201ENST00000564593 TRMOQ9BU70 441 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 FTOQ9C0B1 505 aaKnown RBP eCLIP4.9□□□□□ -1.63
LINC00560-201ENST00000564593 CDT1Q9H211 546 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 SCPEP1Q9HB40 452 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 FBRSL1Q9HCM7 1045 aaKnown RBP4.9□□□□□ -1.63
LINC00560-201ENST00000564593 TRNAU1APQ9NX07 287 aaKnown RBP4.9□□□□□ -1.63
LINC00560-201ENST00000564593 NDRG3Q9UGV2 375 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 VPS28Q9UK41 221 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 PCDHA12Q9UN75 941 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 TNFRSF18Q9Y5U5 241 aa4.9□□□□□ -1.63
LINC00560-201ENST00000564593 RSF1Q96T23 1441 aaPredicted RBP4.9□□□□□ -1.63
LINC00560-201ENST00000564593 PTGES3LE9PB15 166 aa4.89□□□□□ -1.63
LINC00560-201ENST00000564593 MDM4O15151 490 aa4.89□□□□□ -1.63
LINC00560-201ENST00000564593 SEC14L5O43304 696 aa4.89□□□□□ -1.63
LINC00560-201ENST00000564593 PAGE4O60829 102 aa4.89□□□□□ -1.63
LINC00560-201ENST00000564593 ZC3H11AO75152 810 aaKnown RBP eCLIP4.89□□□□□ -1.63
LINC00560-201ENST00000564593 PPFIA2O75334 1257 aa4.89□□□□□ -1.63
LINC00560-201ENST00000564593 CLDN7O95471 211 aa4.89□□□□□ -1.63
LINC00560-201ENST00000564593 RARGP13631 454 aa4.89□□□□□ -1.63
LINC00560-201ENST00000564593 ALOX12P18054 663 aa4.89□□□□□ -1.63
LINC00560-201ENST00000564593 PPP3CCP48454 512 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms