RNA–Protein interactions for RNA: ENST00000564475.5

FANCA-215, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2

Gene FANCA, Length 732 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-215ENST00000564475 PCDH9Q9HC56 1237 aa11.9□□□□□ -0.5
FANCA-215ENST00000564475 C11orf16Q9NQ32 467 aa11.9□□□□□ -0.5
FANCA-215ENST00000564475 DKK3Q9UBP4 350 aa11.9□□□□□ -0.5
FANCA-215ENST00000564475 WASF2Q9Y6W5 498 aa11.9□□□□□ -0.5
FANCA-215ENST00000564475 K7ESF4 209 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 PSMD3O43242 534 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 UGT2B4P06133 528 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 CTSLP07711 333 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 XPAP23025 273 aaPredicted RBP11.89□□□□□ -0.51
FANCA-215ENST00000564475 CD68P34810 354 aaPredicted RBP11.89□□□□□ -0.51
FANCA-215ENST00000564475 CD86P42081 329 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 SUOXP51687 545 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 NIPAL4Q0D2K0 466 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 MPP3Q13368 585 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 DHX34Q14147 1143 aaKnown RBP11.89□□□□□ -0.51
FANCA-215ENST00000564475 PPP1R7Q15435 360 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 ARMC12Q5T9G4 340 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 TTC27Q6P3X3 843 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 USP30Q70CQ3 517 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 MAATS1Q7Z4T9 603 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 KLHL7Q8IXQ5 586 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 NDUFAF2Q8N183 169 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.89□□□□□ -0.51
FANCA-215ENST00000564475 MDGA1Q8NFP4 955 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 GANCQ8TET4 914 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 ERLEC1Q96DZ1 483 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 KLHL32Q96NJ5 620 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 RBM15Q96T37 977 aaKnown RBP eCLIP11.89□□□□□ -0.511e-6■■□□□ 12.5
FANCA-215ENST00000564475 OMDQ99983 421 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 ADGRE3Q9BY15 652 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 HDAC8Q9BY41 377 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 POLR3BQ9NW08 1133 aaPredicted RBP11.89□□□□□ -0.51
FANCA-215ENST00000564475 C2orf42Q9NWW7 574 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 FAM153AQ9UHL3 310 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 FZD4Q9ULV1 537 aa11.89□□□□□ -0.51
FANCA-215ENST00000564475 ARIH1Q9Y4X5 557 aaPredicted RBP11.89□□□□□ -0.51
FANCA-215ENST00000564475 PLXND1Q9Y4D7 1925 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 TSPAN11A1L157 253 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 TTC24A2A3L6 582 aaPredicted RBP11.88□□□□□ -0.51
FANCA-215ENST00000564475 CTAGE15A4D2H0 777 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 ERI2A8K979 691 aaKnown RBP11.88□□□□□ -0.51
FANCA-215ENST00000564475 E7EVH7 732 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 DLL1O00548 723 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 AXIN1O15169 862 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 MID1O15344 667 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 SLC7A4O43246 635 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 HTRA2O43464 458 aaPredicted RBP11.88□□□□□ -0.51
FANCA-215ENST00000564475 PIGNO95427 931 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 KRT14P02533 472 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 MMP2P08253 660 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 CTAGE8P0CG41 777 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 PSMB4P28070 264 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 OXTRP30559 389 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 GKP32189 559 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 NEK3P51956 506 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 RPL26P61254 145 aaKnown RBP11.88□□□□□ -0.51
FANCA-215ENST00000564475 SKOR1P84550 965 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 DR1Q01658 176 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 CSTF1Q05048 431 aaKnown RBP11.88□□□□□ -0.51
FANCA-215ENST00000564475 ZNF528Q3MIS6 628 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 CCDC70Q6NSX1 233 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 FBXL19Q6PCT2 694 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 ERN2Q76MJ5 926 aaKnown RBP11.88□□□□□ -0.51
FANCA-215ENST00000564475 CTAGE6Q86UF2 777 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 CAMK1DQ8IU85 385 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 CTAGE4Q8IX94 777 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 PDCD6IPQ8WUM4 868 aaKnown RBP11.88□□□□□ -0.51
FANCA-215ENST00000564475 SPOCK2Q92563 424 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 RAB7BQ96AH8 199 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 IFT43Q96FT9 208 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 SPACA7Q96KW9 195 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 KRT12Q99456 494 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 PRRX2Q99811 253 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 FSD1LQ9BXM9 530 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 ITM2CQ9NQX7 267 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 FBXL12Q9NXK8 326 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 SARDHQ9UL12 918 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 RPL26L1Q9UNX3 145 aaKnown RBP11.88□□□□□ -0.51
FANCA-215ENST00000564475 PCDHGC4Q9Y5F7 938 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 RAI2Q9Y5P3 530 aa11.88□□□□□ -0.51
FANCA-215ENST00000564475 C16orf96A6NNT2 1141 aa11.87□□□□□ -0.51
FANCA-215ENST00000564475 TRAFD1O14545 582 aaPredicted RBP11.87□□□□□ -0.51
FANCA-215ENST00000564475 GALR2O43603 387 aaPredicted RBP11.87□□□□□ -0.51
FANCA-215ENST00000564475 PMPCBO75439 489 aa11.87□□□□□ -0.51
FANCA-215ENST00000564475 GJB3O75712 270 aa11.87□□□□□ -0.51
FANCA-215ENST00000564475 RNASEH2AO75792 299 aaKnown RBP11.87□□□□□ -0.51
FANCA-215ENST00000564475 PGLSO95336 258 aa11.87□□□□□ -0.51
FANCA-215ENST00000564475 CPP00450 1065 aa11.87□□□□□ -0.51
FANCA-215ENST00000564475 EPOP01588 193 aa11.87□□□□□ -0.51
FANCA-215ENST00000564475 IGLV3-19P01714 112 aa11.87□□□□□ -0.51
FANCA-215ENST00000564475 RPL22P35268 128 aaKnown RBP11.87□□□□□ -0.51
FANCA-215ENST00000564475 LMAN1P49257 510 aa11.87□□□□□ -0.51
FANCA-215ENST00000564475 EPHB1P54762 984 aa11.87□□□□□ -0.51
FANCA-215ENST00000564475 C2orf54Q08AI8 447 aa11.87□□□□□ -0.51
FANCA-215ENST00000564475 TRAF2Q12933 501 aa11.87□□□□□ -0.51
FANCA-215ENST00000564475 USP39Q53GS9 565 aaKnown RBP11.87□□□□□ -0.51
FANCA-215ENST00000564475 PRPF39Q86UA1 669 aaKnown RBP11.87□□□□□ -0.51
FANCA-215ENST00000564475 CACUL1Q86Y37 369 aa11.87□□□□□ -0.51
FANCA-215ENST00000564475 HDDC3Q8N4P3 179 aa11.87□□□□□ -0.51
FANCA-215ENST00000564475 SPATA22Q8NHS9 363 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms