RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 OR4C6Q8NH72 309 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 FAM174AQ8TBP5 190 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 CPLX3Q8WVH0 158 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 VOPP1Q96AW1 172 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 KLF6Q99612 283 aaPredicted RBP17.89■□□□□ 0.45
NME3-205ENST00000563854 SP110Q9HB58 689 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 PDFQ9HBH1 243 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 RAXQ9Y2V3 346 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 GOLGA6L19H0YKK7 550 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 H3BM21 787 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 AREL1O15033 823 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 PRAMEF11O60813 436 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 LRCH4O75427 683 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 NEBLO76041 1014 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 TM7SF2O76062 418 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 CDK4P11802 303 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 MYF5P13349 255 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 ERCC2P18074 760 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 HNRNPKP61978 463 aaKnown RBP eCLIP17.88■□□□□ 0.45
NME3-205ENST00000563854 CAMK2BQ13554 666 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 SMTNL2Q2TAL5 461 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 KLHL40Q2TBA0 621 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 C19orf48Q6RUI8 117 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 PDCD7Q8N8D1 485 aaKnown RBP17.88■□□□□ 0.45
NME3-205ENST00000563854 DENND6BQ8NEG7 585 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 LENG8Q96PV6 779 aaPredicted RBP17.88■□□□□ 0.45
NME3-205ENST00000563854 C1QTNF7Q9BXJ2 289 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 EDEM3Q9BZQ6 932 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 MRPL47Q9HD33 250 aaKnown RBP17.88■□□□□ 0.45
NME3-205ENST00000563854 DMXL2Q8TDJ6 3036 aa17.88■□□□□ 0.45
NME3-205ENST00000563854 SPTY2D1-AS1A0A0U1RR47 76 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 EIF3CLB5ME19 914 aaKnown RBP17.87■□□□□ 0.45
NME3-205ENST00000563854 PALMO75781 387 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 PRKCGP05129 697 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 MYBL1P10243 752 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 TIMP2P16035 220 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 IGFALSP35858 605 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 THOP1P52888 689 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 UBASH3AP57075 661 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 TARDBPQ13148 414 aaKnown RBP eCLIP17.87■□□□□ 0.45
NME3-205ENST00000563854 TPRG1LQ5T0D9 272 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 ARHGAP36Q6ZRI8 547 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 CYP4V2Q6ZWL3 525 aaPredicted RBP17.87■□□□□ 0.45
NME3-205ENST00000563854 NPWQ8N729 165 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 ZNF548Q8NEK5 533 aaPredicted RBP17.87■□□□□ 0.45
NME3-205ENST00000563854 FNIP1Q8TF40 1166 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 HSPH1Q92598 858 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 IFT43Q96FT9 208 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 EIF3CQ99613 913 aaKnown RBP17.87■□□□□ 0.45
NME3-205ENST00000563854 CINPQ9BW66 212 aaPredicted RBP17.87■□□□□ 0.45
NME3-205ENST00000563854 ZWILCHQ9H900 591 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 GPR27Q9NS67 375 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 DKK3Q9UBP4 350 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 LHX6Q9UPM6 363 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 COQ6Q9Y2Z9 468 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 MFHAS1Q9Y4C4 1052 aa17.87■□□□□ 0.45
NME3-205ENST00000563854 TDRD6O60522 2096 aaKnown RBP17.86■□□□□ 0.45
NME3-205ENST00000563854 NEMP2A6NFY4 417 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 JUNDP17535 347 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 ACP1P24666 158 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 RGRP47804 291 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 SEMG2Q02383 582 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 ILKQ13418 452 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 NFKBIBQ15653 356 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 FIGNQ5HY92 759 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 ARHGAP12Q8IWW6 846 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 TSEN2Q8NCE0 465 aaKnown RBP17.86■□□□□ 0.45
NME3-205ENST00000563854 LMX1AQ8TE12 382 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 ASB12Q8WXK4 309 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 NXPE2Q96DL1 559 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 CPEB1Q9BZB8 566 aaKnown RBP17.86■□□□□ 0.45
NME3-205ENST00000563854 SUV39H2Q9H5I1 410 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 NLGN3Q9NZ94 848 aa17.86■□□□□ 0.45
NME3-205ENST00000563854 H3BRJ5 948 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 CSF2P04141 144 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 GIMD1P0DJR0 217 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 NME1P15531 152 aaKnown RBP17.85■□□□□ 0.45
NME3-205ENST00000563854 TCF4P15884 667 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 PFN3P60673 137 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 ELP6Q0PNE2 266 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 GRM3Q14832 879 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 IRF4Q15306 451 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 DEFB133Q30KQ1 61 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 ERAP2Q6P179 960 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 CAMK1DQ8IU85 385 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 RBFAQ8N0V3 343 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 BTBD6Q96KE9 485 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 APOLD1Q96LR9 279 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 THAP2Q9H0W7 228 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 ISCUQ9H1K1 167 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 PCDH12Q9NPG4 1184 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 MBNL1Q9NR56 388 aaKnown RBP17.85■□□□□ 0.45
NME3-205ENST00000563854 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.85■□□□□ 0.45
NME3-205ENST00000563854 CWC15Q9P013 229 aaKnown RBP17.85■□□□□ 0.45
NME3-205ENST00000563854 APOBEC3BQ9UH17 382 aaKnown RBP17.85■□□□□ 0.45
NME3-205ENST00000563854 KLF15Q9UIH9 416 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 AK5Q9Y6K8 562 aa17.85■□□□□ 0.45
NME3-205ENST00000563854 GOLGA4Q13439 2230 aaKnown RBP17.84■□□□□ 0.45
NME3-205ENST00000563854 A0A1W2PQJ5 194 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 K7ESM1 405 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms