RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 CCDC114Q96M63 670 aa10.51□□□□□ -0.73
SF3B3-204ENST00000563739 ARHGAP9Q9BRR9 750 aa10.51□□□□□ -0.73
SF3B3-204ENST00000563739 TRIM62Q9BVG3 475 aa10.51□□□□□ -0.73
SF3B3-204ENST00000563739 INTS2Q9H0H0 1204 aaKnown RBP10.51□□□□□ -0.73
SF3B3-204ENST00000563739 TKTL2Q9H0I9 626 aa10.51□□□□□ -0.73
SF3B3-204ENST00000563739 SIK2Q9H0K1 926 aa10.51□□□□□ -0.73
SF3B3-204ENST00000563739 SEMA6CQ9H3T2 930 aa10.51□□□□□ -0.73
SF3B3-204ENST00000563739 ZDHHC6Q9H6R6 413 aa10.51□□□□□ -0.73
SF3B3-204ENST00000563739 DYRK4Q9NR20 520 aa10.51□□□□□ -0.73
SF3B3-204ENST00000563739 DAAM1Q9Y4D1 1078 aa10.51□□□□□ -0.73
SF3B3-204ENST00000563739 A0A1W2PQ27 194 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 A0A1W2PQ64 194 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 A0A1W2PQC6 194 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 ILVBLA1L0T0 632 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 BLACEA4D250 179 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 TSPAN6O43657 245 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 MMP20O60882 483 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 GM2AP17900 193 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 BMP6P22004 513 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 CASRP41180 1078 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 RPIAP49247 311 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 POLE2P56282 527 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 B4GALNT1Q00973 533 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 KCNAB2Q13303 367 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 WSCD2Q2TBF2 565 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 CERCAMQ5T4B2 595 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 ZNF658Q5TYW1 1059 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-204ENST00000563739 TTI2Q6NXR4 508 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 FOXR2Q6PJQ5 311 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 OGFOD3Q6PK18 319 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 CCNJLQ8IV13 435 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 PASD1Q8IV76 773 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 PELI3Q8N2H9 469 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 NETO2Q8NC67 525 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 C1orf131Q8NDD1 294 aaKnown RBP10.5□□□□□ -0.73
SF3B3-204ENST00000563739 EHBP1Q8NDI1 1231 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 JPH3Q8WXH2 748 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-204ENST00000563739 OR1E3Q8WZA6 343 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 ARHGEF2Q92974 986 aaKnown RBP10.5□□□□□ -0.73
SF3B3-204ENST00000563739 NKD1Q969G9 470 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 PGAP3Q96FM1 320 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-204ENST00000563739 MED15Q96RN5 788 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 TBCBQ99426 244 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 EPAS1Q99814 870 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 MAGEB5Q9BZ81 275 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 EDEM3Q9BZQ6 932 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 ADNPQ9H2P0 1102 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 GULP1Q9UBP9 304 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 IPO11Q9UI26 975 aaKnown RBP10.5□□□□□ -0.73
SF3B3-204ENST00000563739 APPL1Q9UKG1 709 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 PLAAQ9Y263 795 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 COQ6Q9Y2Z9 468 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 RNF215Q9Y6U7 377 aa10.5□□□□□ -0.73
SF3B3-204ENST00000563739 M0QYT0 321 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 P4HA2O15460 535 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 THAP12O43422 761 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 DUX1O43812 170 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 ZNF202O95125 648 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 UGT2B4P06133 528 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 LIFP15018 202 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 GNA15P30679 374 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 YPEL5P62699 121 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 PPARDQ03181 441 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 LRRC63Q05C16 580 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 HLTFQ14527 1009 aaKnown RBP eCLIP10.49□□□□□ -0.73
SF3B3-204ENST00000563739 ARHGAP44Q17R89 818 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 ZNF805Q5CZA5 627 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 EFHC2Q5JST6 749 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 ATXN7L2Q5T6C5 722 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-204ENST00000563739 ESRP1Q6NXG1 681 aaKnown RBP10.49□□□□□ -0.73
SF3B3-204ENST00000563739 ZSCAN30Q86W11 494 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 NLRP14Q86W24 1093 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 C17orf82Q86X59 251 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-204ENST00000563739 ZSWIM9Q86XI8 627 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 PLPP6Q8IY26 295 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 FSTL5Q8N475 847 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-204ENST00000563739 CCL4L1Q8NHW4 92 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 RNF34Q969K3 372 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 RAB7BQ96AH8 199 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 MIB2Q96AX9 1013 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 TMEM74Q96NL1 305 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 RBM15Q96T37 977 aaKnown RBP eCLIP10.49□□□□□ -0.73
SF3B3-204ENST00000563739 KLC2Q9H0B6 622 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 FGF22Q9HCT0 170 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 WDR70Q9NW82 654 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 HECAQ9UBI9 543 aaPredicted RBP10.49□□□□□ -0.73
SF3B3-204ENST00000563739 SLC12A6Q9UHW9 1150 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 CFAP45Q9UL16 551 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 PCDHGC3Q9UN70 934 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 GPR34Q9UPC5 381 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 ST14Q9Y5Y6 855 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 HIVEP3Q5T1R4 2406 aa10.49□□□□□ -0.73
SF3B3-204ENST00000563739 CACNA1DQ01668 2161 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 K7EM74 188 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 B4GAT1O43505 415 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 JMJD7P0C870 316 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 PNMA6AP0CW24 399 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-204ENST00000563739 FGF3P11487 239 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-204ENST00000563739 SFTPCP11686 197 aa10.48□□□□□ -0.73
SF3B3-204ENST00000563739 KRT5P13647 590 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms