RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 GDAP1L1Q96MZ0 367 aa15.94■□□□□ 0.14
CLK3-211ENST00000563297 DEPDC7Q96QD5 511 aa15.94■□□□□ 0.14
CLK3-211ENST00000563297 ERGIC2Q96RQ1 377 aa15.94■□□□□ 0.14
CLK3-211ENST00000563297 TCEAL2Q9H3H9 227 aaPredicted RBP15.94■□□□□ 0.14
CLK3-211ENST00000563297 MBNL1Q9NR56 388 aaKnown RBP15.94■□□□□ 0.14
CLK3-211ENST00000563297 SEPT11Q9NVA2 429 aaKnown RBP15.94■□□□□ 0.14
CLK3-211ENST00000563297 DKK3Q9UBP4 350 aa15.94■□□□□ 0.14
CLK3-211ENST00000563297 PNMA8BQ9ULN7 279 aaPredicted RBP15.94■□□□□ 0.14
CLK3-211ENST00000563297 LRRK1Q38SD2 2015 aa15.94■□□□□ 0.14
CLK3-211ENST00000563297 CPED1A4D0V7 1026 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 EME2A4GXA9 379 aaPredicted RBP15.93■□□□□ 0.14
CLK3-211ENST00000563297 INSIG1O15503 277 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 USP12O75317 370 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 CSO75390 466 aaKnown RBP15.93■□□□□ 0.14
CLK3-211ENST00000563297 GCATO75600 419 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 IGSF6O95976 241 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 MPOP05164 745 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 TGM2P21980 687 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 THOP1P52888 689 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 RHOAP61586 193 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 YPEL5P62699 121 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 CCDC173Q0VFZ6 552 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 C1orf61Q13536 156 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 PTK2BQ14289 1009 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 KIF26BQ2KJY2 2108 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 KLHL40Q2TBA0 621 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 ACAD10Q6JQN1 1059 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 DNAJC24Q6P3W2 148 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 GUSBP11Q6P575 273 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 APTXQ7Z2E3 356 aaKnown RBP15.93■□□□□ 0.14
CLK3-211ENST00000563297 VPS36Q86VN1 386 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 MCOLN2Q8IZK6 566 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 RBFAQ8N0V3 343 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 UMODL1-AS1Q8N2C9 162 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 TP53I13Q8NBR0 393 aaPredicted RBP15.93■□□□□ 0.14
CLK3-211ENST00000563297 ANKRD20A12PQ8NF67 263 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 MAPK15Q8TD08 544 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 MCEEQ96PE7 176 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 UBL7Q96S82 380 aaPredicted RBP15.93■□□□□ 0.14
CLK3-211ENST00000563297 IL12RB2Q99665 862 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 CNPY3Q9BT09 278 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 CPEB1Q9BZB8 566 aaKnown RBP15.93■□□□□ 0.14
CLK3-211ENST00000563297 CATSPERBQ9H7T0 1116 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 ANO10Q9NW15 660 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 NCKIPSDQ9NZQ3 722 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 SPASTQ9UBP0 616 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 LHX3Q9UBR4 397 aa15.93■□□□□ 0.14
CLK3-211ENST00000563297 ANKRD62A6NC57 917 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 EIF4E1BA6NMX2 242 aaKnown RBP15.92■□□□□ 0.14
CLK3-211ENST00000563297 CDK11BP21127 795 aaKnown RBP15.92■□□□□ 0.14
CLK3-211ENST00000563297 EIF4A3P38919 411 aaKnown RBP15.92■□□□□ 0.14
CLK3-211ENST00000563297 LSSP48449 732 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 AIF1P55008 147 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 ADKP55263 362 aaKnown RBP15.92■□□□□ 0.14
CLK3-211ENST00000563297 MYL5Q02045 173 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 OGDHQ02218 1023 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 TLE3Q04726 772 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 NCAPHQ15003 741 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 PARP15Q460N3 678 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 TMEM52BQ4KMG9 183 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 SASS6Q6UVJ0 657 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 EFL1Q7Z2Z2 1120 aaKnown RBP15.92■□□□□ 0.14
CLK3-211ENST00000563297 IRF2BP2Q7Z5L9 587 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 SPACA3Q8IXA5 215 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 PHACTR4Q8IZ21 702 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 LSMEM2Q8N112 164 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 HCAR2Q8TDS4 363 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 CXorf40AQ8TE69 158 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 ZNF578Q96N58 590 aaPredicted RBP15.92■□□□□ 0.14
CLK3-211ENST00000563297 EPAS1Q99814 870 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 WRAP53Q9BUR4 548 aaKnown RBP15.92■□□□□ 0.14
CLK3-211ENST00000563297 BOCQ9BWV1 1114 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 CLPBQ9H078 707 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 HSD3B7Q9H2F3 369 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 POLR1BQ9H9Y6 1135 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 APOBEC3BQ9UH17 382 aaKnown RBP15.92■□□□□ 0.14
CLK3-211ENST00000563297 MGAQ8IWI9 3026 aa15.92■□□□□ 0.14
CLK3-211ENST00000563297 LMO7DNF2Z398 122 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 TOR1BO14657 336 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 RIOK3O14730 519 aaKnown RBP15.91■□□□□ 0.14
CLK3-211ENST00000563297 YY2O15391 372 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 LZTS3O60299 673 aaPredicted RBP15.91■□□□□ 0.14
CLK3-211ENST00000563297 DXOO77932 396 aaKnown RBP15.91■□□□□ 0.14
CLK3-211ENST00000563297 SUOXP51687 545 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 GABREP78334 506 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 ISXQ2M1V0 245 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 PRRT3Q5FWE3 981 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 FAXCQ5TGI0 409 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 DCUN1D2Q6PH85 259 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 HIC2Q96JB3 615 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 EXOC2Q96KP1 924 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 TBATAQ96M53 351 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 FCRL3Q96P31 734 aaPredicted RBP15.91■□□□□ 0.14
CLK3-211ENST00000563297 C1QTNF7Q9BXJ2 289 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 SUV39H2Q9H5I1 410 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 LRRC19Q9H756 370 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 TAS2R14Q9NYV8 317 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 COQ6Q9Y2Z9 468 aa15.91■□□□□ 0.14
CLK3-211ENST00000563297 COL27A1Q8IZC6 1860 aaPredicted RBP15.91■□□□□ 0.14
CLK3-211ENST00000563297 A0A1W2PNU3 283 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms