RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 GOLGA6CA6NDK9 693 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 GOLGA6BA6NDN3 693 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 GCATO75600 419 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 RNASEH2AO75792 299 aaKnown RBP19.01■□□□□ 0.63
RAB40C-207ENST00000563109 GOLGA6DP0CG33 693 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 COILP38432 576 aaPredicted RBP19.01■□□□□ 0.63
RAB40C-207ENST00000563109 TNNT3P45378 269 aaPredicted RBP19.01■□□□□ 0.63
RAB40C-207ENST00000563109 KCNJ1P48048 391 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 FNTBP49356 437 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 NIPAL4Q0D2K0 466 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 SLC14A2Q15849 920 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 WHAMMP3Q1A5X7 153 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 USP39Q53GS9 565 aaKnown RBP19.01■□□□□ 0.63
RAB40C-207ENST00000563109 CCDC137Q6PK04 289 aaKnown RBP19.01■□□□□ 0.63
RAB40C-207ENST00000563109 USP30Q70CQ3 517 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 CAMK1DQ8IU85 385 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 ARRDC2Q8TBH0 407 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 PDCD6IPQ8WUM4 868 aaKnown RBP19.01■□□□□ 0.63
RAB40C-207ENST00000563109 ARRDC3Q96B67 414 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 FCRL5Q96RD9 977 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 RBM15Q96T37 977 aaKnown RBP eCLIP19.01■□□□□ 0.631e-6■■■■■ 29.9
RAB40C-207ENST00000563109 FBXL12Q9NXK8 326 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 GOLGA6AQ9NYA3 693 aa19.01■□□□□ 0.63
RAB40C-207ENST00000563109 USP36Q9P275 1121 aaKnown RBP19.01■□□□□ 0.63
RAB40C-207ENST00000563109 PLXND1Q9Y4D7 1925 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 PDE2AO00408 941 aaPredicted RBP19■□□□□ 0.63
RAB40C-207ENST00000563109 ZNF500O60304 480 aaPredicted RBP19■□□□□ 0.63
RAB40C-207ENST00000563109 ANXA9O76027 345 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 GAS8O95995 478 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 XPAP23025 273 aaPredicted RBP19■□□□□ 0.63
RAB40C-207ENST00000563109 OXTRP30559 389 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 CD68P34810 354 aaPredicted RBP19■□□□□ 0.63
RAB40C-207ENST00000563109 TPMTP51580 245 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 NEK3P51956 506 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 SKOR1P84550 965 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 DMWDQ09019 674 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 ARMC12Q5T9G4 340 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 TTC27Q6P3X3 843 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 FBXL19Q6PCT2 694 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 BRAT1Q6PJG6 821 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 ERN2Q76MJ5 926 aaKnown RBP19■□□□□ 0.63
RAB40C-207ENST00000563109 AADATQ8N5Z0 425 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 HCAR2Q8TDS4 363 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 LRRC45Q96CN5 670 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 HDAC8Q9BY41 377 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 ITM2CQ9NQX7 267 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 VPS45Q9NRW7 570 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 PAK5Q9P286 719 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 DKK3Q9UBP4 350 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 FZD4Q9ULV1 537 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 CYP8B1Q9UNU6 501 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 RAI2Q9Y5P3 530 aa19■□□□□ 0.63
RAB40C-207ENST00000563109 CACNA1IQ9P0X4 2223 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 C16orf96A6NNT2 1141 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 F5H423 210 aaPredicted RBP18.99■□□□□ 0.63
RAB40C-207ENST00000563109 SLC7A4O43246 635 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 CPP00450 1065 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 SP9P0CG40 484 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 NFKBIAP25963 317 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 PSMB4P28070 264 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 METAP1P53582 386 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 GEMP55040 296 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 CNTN1Q12860 1018 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 TRAF2Q12933 501 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 DNTTIP2Q5QJE6 756 aaKnown RBP18.99■□□□□ 0.63
RAB40C-207ENST00000563109 FAM182AQ5T1J6 154 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 C4orf22Q6V702 233 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 PARS2Q7L3T8 475 aaKnown RBP18.99■□□□□ 0.63
RAB40C-207ENST00000563109 FAM124AQ86V42 546 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 KLHL7Q8IXQ5 586 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 DDX47Q9H0S4 455 aaKnown RBP18.99■□□□□ 0.63
RAB40C-207ENST00000563109 ZSCAN32Q9NX65 697 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 FAM153AQ9UHL3 310 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 AAR2Q9Y312 384 aaKnown RBP18.99■□□□□ 0.63
RAB40C-207ENST00000563109 PCDHGC4Q9Y5F7 938 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 EML5Q05BV3 1969 aa18.99■□□□□ 0.63
RAB40C-207ENST00000563109 TSPAN11A1L157 253 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 HTRA2O43464 458 aaPredicted RBP18.98■□□□□ 0.63
RAB40C-207ENST00000563109 ECEL1O95672 775 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 IGLV3-19P01714 112 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 MMP2P08253 660 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 ADRB3P13945 408 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 DRD3P35462 400 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 P2RY2P41231 377 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 POLR2LP62875 67 aaKnown RBP18.98■□□□□ 0.63
RAB40C-207ENST00000563109 MPP3Q13368 585 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 PCSK7Q16549 785 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 PARP6Q2NL67 630 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.98■□□□□ 0.63
RAB40C-207ENST00000563109 PRPF39Q86UA1 669 aaKnown RBP18.98■□□□□ 0.63
RAB40C-207ENST00000563109 NDUFAF2Q8N183 169 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 SPATA22Q8NHS9 363 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 RAB7BQ96AH8 199 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 ECHDC3Q96DC8 303 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 IFT43Q96FT9 208 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 TDRD1Q9BXT4 1180 aaKnown RBP18.98■□□□□ 0.63
RAB40C-207ENST00000563109 BTBD1Q9H0C5 482 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 SGK2Q9HBY8 427 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 PCDH9Q9HC56 1237 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 PCDHB9Q9Y5E1 797 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms