RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 A0A1B0GTH6 734 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 TMEM191CA6NGB0 347 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 ZSCAN5CA6NGD5 496 aaPredicted RBP11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 K7ESM1 405 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 TSPAN6O43657 245 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 PRAMEF11O60813 436 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 IGSF6O95976 241 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 FTLP02792 175 aaPredicted RBP11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 CELA2BP08218 269 aaPredicted RBP11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 C1SP09871 688 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 NME1P15531 152 aaKnown RBP11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 MIPP30301 263 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 YBEYP58557 167 aaPredicted RBP11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 TPI1P60174 286 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 SGCGQ13326 291 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 PARP15Q460N3 678 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 INO80DQ53TQ3 878 aaPredicted RBP11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 AFMIDQ63HM1 303 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 KCTD16Q68DU8 428 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 TTC7BQ86TV6 843 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 PARGQ86W56 976 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 TP53I13Q8NBR0 393 aaPredicted RBP11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 RAB7BQ96AH8 199 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 LRIG1Q96JA1 1093 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 OSBPL1AQ9BXW6 950 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 CATSPERBQ9H7T0 1116 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 PARVAQ9NVD7 372 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 AIPL1Q9NZN9 384 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 UBA2Q9UBT2 640 aaPredicted RBP11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 MYO6Q9UM54 1294 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 PCDHB1Q9Y5F3 818 aa11.18□□□□□ -0.62
KLHDC4-209ENST00000562872 COL27A1Q8IZC6 1860 aaPredicted RBP11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 ANKRD62A6NC57 917 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 EEF2KO00418 725 aaKnown RBP11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 FPGTO14772 594 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 SCAMP1O15126 338 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 MUSKO15146 869 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 FGF10O15520 208 aaPredicted RBP11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 LRCH4O75427 683 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 GCATO75600 419 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 CSF2P04141 144 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 CKMT1AP12532 417 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 JUNDP17535 347 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 IL1R2P27930 398 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 ITPKBP27987 946 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 HNF1BP35680 557 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 PRKCIP41743 596 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 RABIFP47224 123 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 ZNF165P49910 485 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 PAPOLAP51003 745 aaKnown RBP11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 AIF1P55008 147 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 DAB2P98082 770 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 ILKQ13418 452 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 C1orf61Q13536 156 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 IRF4Q15306 451 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 TCEA2Q15560 299 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 DEFB133Q30KQ1 61 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 TXNRD3NBQ6F5E7 133 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 RFX8Q6ZV50 586 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 PDZD3Q86UT5 571 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 CAMK1DQ8IU85 385 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 DCBLD1Q8N8Z6 715 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 TSEN2Q8NCE0 465 aaKnown RBP11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 DENND6BQ8NEG7 585 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 FUBP1Q96AE4 644 aaKnown RBP11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 ZNF653Q96CK0 615 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 IFT43Q96FT9 208 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 VCPIP1Q96JH7 1222 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 DCBLD2Q96PD2 775 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 NAT10Q9H0A0 1025 aaKnown RBP11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 PCDH12Q9NPG4 1184 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 ETNK2Q9NVF9 386 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 NLGN3Q9NZ94 848 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 MYO1AQ9UBC5 1043 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 DKK3Q9UBP4 350 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 CNOT8Q9UFF9 292 aaKnown RBP11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 CLCA2Q9UQC9 943 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 IGSF10Q6WRI0 2623 aa11.17□□□□□ -0.62
KLHDC4-209ENST00000562872 SMG1Q96Q15 3661 aaKnown RBP11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 A0A087WV48 116 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 A0A1W2PQC6 194 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 TSPAN11A1L157 253 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 TTC24A2A3L6 582 aaPredicted RBP11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 OPA1O60313 960 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 BRINP1O60477 761 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 MT-CO3P00414 261 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 ERCC2P18074 760 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 HNRNPKP61978 463 aaKnown RBP eCLIP11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 KLHL30Q0D2K2 578 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 DPYSQ14117 519 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 NR1I3Q14994 352 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 CDKN3Q16667 212 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 SMTNL2Q2TAL5 461 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 KLHL40Q2TBA0 621 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 WSCD2Q2TBF2 565 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 TMEM52BQ4KMG9 183 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 PPP6R3Q5H9R7 873 aaPredicted RBP11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 ERMARDQ5T6L9 678 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 CDCP2Q5VXM1 449 aa11.16□□□□□ -0.62
KLHDC4-209ENST00000562872 HGSNATQ68CP4 663 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms