RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 GRIN3AQ8TCU5 1115 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 ZNF592Q92610 1267 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 MAGOHBQ96A72 148 aaKnown RBP12.89□□□□□ -0.35
CDH11-204ENST00000562712 IMP4Q96G21 291 aaKnown RBP12.89□□□□□ -0.35
CDH11-204ENST00000562712 PPP1R16AQ96I34 528 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 NSMCE3Q96MG7 304 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 FCRL5Q96RD9 977 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 HDAC8Q9BY41 377 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 SMARCAL1Q9NZC9 954 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 USP36Q9P275 1121 aaKnown RBP12.89□□□□□ -0.35
CDH11-204ENST00000562712 KLHL8Q9P2G9 620 aaPredicted RBP12.89□□□□□ -0.35
CDH11-204ENST00000562712 DKK3Q9UBP4 350 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 NCKAP1Q9Y2A7 1128 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 TTLL3Q9Y4R7 772 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 CFAP54Q96N23 3096 aa12.89□□□□□ -0.35
CDH11-204ENST00000562712 A0A1W2PQ67 120 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 KPNA3O00505 521 aaPredicted RBP12.88□□□□□ -0.35
CDH11-204ENST00000562712 TRAFD1O14545 582 aaPredicted RBP12.88□□□□□ -0.35
CDH11-204ENST00000562712 HTRA2O43464 458 aaPredicted RBP12.88□□□□□ -0.35
CDH11-204ENST00000562712 ZNF500O60304 480 aaPredicted RBP12.88□□□□□ -0.35
CDH11-204ENST00000562712 PHF2O75151 1096 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 SOCS5O75159 536 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 GJB3O75712 270 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 UGT2B4P06133 528 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 MMP2P08253 660 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 CD68P34810 354 aaPredicted RBP12.88□□□□□ -0.35
CDH11-204ENST00000562712 COILP38432 576 aaPredicted RBP12.88□□□□□ -0.35
CDH11-204ENST00000562712 PSMD8P48556 350 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 GDF10P55107 478 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 POLR2LP62875 67 aaKnown RBP12.88□□□□□ -0.35
CDH11-204ENST00000562712 DSC2Q02487 901 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 DMWDQ09019 674 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 NIPAL4Q0D2K0 466 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 SLC14A2Q15849 920 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 P3H1Q32P28 736 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 ITPRIPL1Q6GPH6 555 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 BRAT1Q6PJG6 821 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 C4orf22Q6V702 233 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 PRPF39Q86UA1 669 aaKnown RBP12.88□□□□□ -0.35
CDH11-204ENST00000562712 CAMK1DQ8IU85 385 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 HDDC3Q8N4P3 179 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 AADATQ8N5Z0 425 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 FAM131CQ96AQ9 280 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 TADA1Q96BN2 335 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 ECHDC3Q96DC8 303 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 SPATA13Q96N96 652 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 KLHL32Q96NJ5 620 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 PPP1R2P1Q96PQ5 205 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 OMDQ99983 421 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 DYRK4Q9NR20 520 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 ZSCAN32Q9NX65 697 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 FBXL12Q9NXK8 326 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 CDC23Q9UJX2 597 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 FZD4Q9ULV1 537 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 PCDHGC4Q9Y5F7 938 aa12.88□□□□□ -0.35
CDH11-204ENST00000562712 TSPAN11A1L157 253 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 C16orf96A6NNT2 1141 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 CCDC188H7C350 402 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 PDE2AO00408 941 aaPredicted RBP12.87□□□□□ -0.35
CDH11-204ENST00000562712 SLC7A4O43246 635 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 URI1O94763 535 aaPredicted RBP12.87□□□□□ -0.35
CDH11-204ENST00000562712 PIGNO95427 931 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 NFKB1P19838 968 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 CNR2P34972 360 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 DRD3P35462 400 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 ACTN2P35609 894 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 P2RY2P41231 377 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 CD86P42081 329 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 KCNJ1P48048 391 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 FNTAP49354 379 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 FNTBP49356 437 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 SUOXP51687 545 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 METAP1P53582 386 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 SKOR1P84550 965 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 CNTN1Q12860 1018 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 IHHQ14623 411 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 PARP6Q2NL67 630 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 MAP7D1Q3KQU3 841 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 FAM182AQ5T1J6 154 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 TTC27Q6P3X3 843 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 CCDC137Q6PK04 289 aaKnown RBP12.87□□□□□ -0.35
CDH11-204ENST00000562712 ERN2Q76MJ5 926 aaKnown RBP12.87□□□□□ -0.35
CDH11-204ENST00000562712 GSTA5Q7RTV2 222 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDH11-204ENST00000562712 CCDC89Q8N998 374 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 ZBTB44Q8NCP5 570 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 CCDC110Q8TBZ0 833 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 RBM15Q96T37 977 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDH11-204ENST00000562712 TPSD1Q9BZJ3 242 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 GBA3Q9H227 469 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 NEUROG2Q9H2A3 272 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 KDM4CQ9H3R0 1056 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 SGK2Q9HBY8 427 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 VPS45Q9NRW7 570 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 PCYOX1Q9UHG3 505 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 RSPH14Q9UHP6 348 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 AAR2Q9Y312 384 aaKnown RBP12.87□□□□□ -0.35
CDH11-204ENST00000562712 PCDHGA2Q9Y5H1 932 aa12.87□□□□□ -0.35
CDH11-204ENST00000562712 RAI2Q9Y5P3 530 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms