RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 NBASA2RRP1 2371 aa20.36■□□□□ 0.85
PDXDC1-207ENST00000562119 USP9XQ93008 2570 aaPredicted RBP20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 A0A1W2PQC6 194 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 BECN2A8MW95 431 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 ALPIP09923 528 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 BLKP51451 505 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 MAPK10P53779 464 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 FOXK1P85037 733 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 SLC6A3Q01959 620 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 ZNF783Q6ZMS7 281 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 TMPRSS9Q7Z410 1059 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 CCNJLQ8IV13 435 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 PLPP6Q8IY26 295 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 RYBPQ8N488 228 aaPredicted RBP20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 GSDMAQ96QA5 445 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 EPAS1Q99814 870 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 SLC12A9Q9BXP2 914 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 ADNPQ9H2P0 1102 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 NOTCH2Q04721 2471 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 NBPF19A0A087WUL8 3843 aa20.35■□□□□ 0.85
PDXDC1-207ENST00000562119 SRGAP2O75044 1071 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 UGT2B4P06133 528 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 HSP90AA1P07900 732 aaKnown RBP20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 CTSEP14091 401 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 ITIH2P19823 946 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 GNA12Q03113 381 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 IRF4Q15306 451 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 KLHL40Q2TBA0 621 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 KCTD16Q68DU8 428 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 C1orf131Q8NDD1 294 aaKnown RBP20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 ZNF397Q8NF99 534 aaPredicted RBP20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 GPR156Q8NFN8 814 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 JPH3Q8WXH2 748 aaPredicted RBP20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 NT5C3BQ969T7 300 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 ISG20Q96AZ6 181 aaKnown RBP20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 TMEM159Q96B96 161 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 KLHL32Q96NJ5 620 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 MAN2B2Q9Y2E5 1009 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 RNF215Q9Y6U7 377 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 MYO9AB2RTY4 2548 aa20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 SPTAN1Q13813 2472 aaKnown RBP20.34■□□□□ 0.85
PDXDC1-207ENST00000562119 KRIT1O00522 736 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 TOR1BO14657 336 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 TM7SF2O76062 418 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 CD44P16070 742 aaKnown RBP20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 SULT1E1P49888 294 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 GJB7Q6PEY0 223 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 RD3Q7Z3Z2 195 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 SLITRK4Q8IW52 837 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 SFTPA2Q8IWL1 248 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 OR6C4Q8NGE1 309 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 SPATA20Q8TB22 786 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 ARHGEF26Q96DR7 871 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 CMKLR1Q99788 373 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 APPL1Q9UKG1 709 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 PCDHGC3Q9UN70 934 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 ZDHHC9Q9Y397 364 aa20.33■□□□□ 0.85
PDXDC1-207ENST00000562119 UNC79Q9P2D8 2635 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 ACVRL1P37023 503 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 POLE2P56282 527 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 KCNAB2Q13303 367 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 PTPN20Q4JDL3 420 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 BORAQ6PGQ7 559 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 SPRED1Q7Z699 444 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 TTC7BQ86TV6 843 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 GKN2Q86XP6 184 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 TRIM59Q8IWR1 403 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 DRC7Q8IY82 874 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 PGAP3Q96FM1 320 aaPredicted RBP20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 PSMG3-AS1Q96PY0 264 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 TBCBQ99426 244 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 WRAP53Q9BUR4 548 aaKnown RBP20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 C1QTNF7Q9BXJ2 289 aa20.32■□□□□ 0.84
PDXDC1-207ENST00000562119 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.32■□□□□ 0.842e-7■□□□□ 10.4
PDXDC1-207ENST00000562119 PSMA7O14818 248 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 RASGRP1O95267 797 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 GLB1P16278 677 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 CD82P27701 267 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 PEX5P50542 639 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 RNASE9P60153 205 aaKnown RBP20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 SRP54P61011 504 aaKnown RBP20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 DEUP1Q05D60 604 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 C16orf72Q14CZ0 275 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 MYLK3Q32MK0 819 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 CERCAMQ5T4B2 595 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 TTI2Q6NXR4 508 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 ENPP7Q6UWV6 458 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 OR2AP1Q8NGE2 309 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 CXorf40AQ8TE69 158 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 ARHGEF2Q92974 986 aaKnown RBP20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 CCDC34Q96HJ3 373 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 DHTKD1Q96HY7 919 aaPredicted RBP20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 ZYG11BQ9C0D3 744 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 SEMA6CQ9H3T2 930 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 RRN3Q9NYV6 651 aa20.31■□□□□ 0.84
PDXDC1-207ENST00000562119 ZFC3H1O60293 1989 aaKnown RBP20.3■□□□□ 0.84
PDXDC1-207ENST00000562119 GSRP00390 522 aa20.3■□□□□ 0.84
PDXDC1-207ENST00000562119 CCL4P13236 92 aa20.3■□□□□ 0.84
PDXDC1-207ENST00000562119 USP8P40818 1118 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms