RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 BAIAP3O94812 1187 aa4□□□□□ -1.77
HERC1-215ENST00000561436 RTN3O95197 1032 aaPredicted RBP4□□□□□ -1.77
HERC1-215ENST00000561436 NFATC1O95644 943 aa4□□□□□ -1.77
HERC1-215ENST00000561436 PLAUP00749 431 aa4□□□□□ -1.77
HERC1-215ENST00000561436 CD4P01730 458 aa4□□□□□ -1.77
HERC1-215ENST00000561436 CYP2A6P11509 494 aaPredicted RBP4□□□□□ -1.77
HERC1-215ENST00000561436 RPS6KB1P23443 525 aa4□□□□□ -1.77
HERC1-215ENST00000561436 CHMP24386 653 aa4□□□□□ -1.77
HERC1-215ENST00000561436 RPS12P25398 132 aaKnown RBP4□□□□□ -1.77
HERC1-215ENST00000561436 MAN1A1P33908 653 aa4□□□□□ -1.77
HERC1-215ENST00000561436 TUBP50607 506 aa4□□□□□ -1.77
HERC1-215ENST00000561436 CYP2J2P51589 502 aa4□□□□□ -1.77
HERC1-215ENST00000561436 MVDP53602 400 aa4□□□□□ -1.77
HERC1-215ENST00000561436 CASP6P55212 293 aa4□□□□□ -1.77
HERC1-215ENST00000561436 CDH15P55291 814 aa4□□□□□ -1.77
HERC1-215ENST00000561436 FKBP1BP68106 108 aa4□□□□□ -1.77
HERC1-215ENST00000561436 FOXD4Q12950 439 aaPredicted RBP4□□□□□ -1.77
HERC1-215ENST00000561436 SLC39A6Q13433 755 aa4□□□□□ -1.77
HERC1-215ENST00000561436 SEC23BQ15437 767 aa4□□□□□ -1.77
HERC1-215ENST00000561436 MTHFSDQ2M296 383 aaKnown RBP4□□□□□ -1.77
HERC1-215ENST00000561436 PARP10Q53GL7 1025 aa4□□□□□ -1.77
HERC1-215ENST00000561436 SLC10A5Q5PT55 438 aa4□□□□□ -1.77
HERC1-215ENST00000561436 TMEM268Q5VZI3 342 aa4□□□□□ -1.77
HERC1-215ENST00000561436 FAM180BQ6P0A1 224 aa4□□□□□ -1.77
HERC1-215ENST00000561436 MIS18BP1Q6P0N0 1132 aa4□□□□□ -1.77
HERC1-215ENST00000561436 MTFR2Q6P444 385 aa4□□□□□ -1.77
HERC1-215ENST00000561436 SLC30A9Q6PML9 568 aa4□□□□□ -1.77
HERC1-215ENST00000561436 ZNF474Q6S9Z5 364 aaPredicted RBP4□□□□□ -1.77
HERC1-215ENST00000561436 ZNF813Q6ZN06 617 aa4□□□□□ -1.77
HERC1-215ENST00000561436 RBM44Q6ZP01 1051 aaKnown RBP4□□□□□ -1.77
HERC1-215ENST00000561436 CYB5R4Q7L1T6 521 aa4□□□□□ -1.77
HERC1-215ENST00000561436 IGFN1Q86VF2 1251 aa4□□□□□ -1.77
HERC1-215ENST00000561436 GHDCQ8N2G8 530 aa4□□□□□ -1.77
HERC1-215ENST00000561436 PAQR4Q8N4S7 273 aaPredicted RBP4□□□□□ -1.77
HERC1-215ENST00000561436 LSM14AQ8ND56 463 aaKnown RBP4□□□□□ -1.77
HERC1-215ENST00000561436 OR52N4Q8NGI2 321 aa4□□□□□ -1.77
HERC1-215ENST00000561436 UCMAQ8WVF2 138 aa4□□□□□ -1.77
HERC1-215ENST00000561436 CNOT9Q92600 299 aaKnown RBP4□□□□□ -1.77
HERC1-215ENST00000561436 KIF1BPQ96EK5 621 aa4□□□□□ -1.77
HERC1-215ENST00000561436 C5orf34Q96MH7 638 aa4□□□□□ -1.77
HERC1-215ENST00000561436 ZNF778Q96MU6 729 aa4□□□□□ -1.77
HERC1-215ENST00000561436 TIGD1Q96MW7 591 aa4□□□□□ -1.77
HERC1-215ENST00000561436 C7orf26Q96N11 449 aa4□□□□□ -1.77
HERC1-215ENST00000561436 FAM118BQ9BPY3 351 aa4□□□□□ -1.77
HERC1-215ENST00000561436 FUZQ9BT04 418 aa4□□□□□ -1.77
HERC1-215ENST00000561436 EFHD1Q9BUP0 239 aa4□□□□□ -1.77
HERC1-215ENST00000561436 HDHD5Q9BXW7 423 aa4□□□□□ -1.77
HERC1-215ENST00000561436 SLC29A3Q9BZD2 475 aa4□□□□□ -1.77
HERC1-215ENST00000561436 ARHGAP39Q9C0H5 1083 aa4□□□□□ -1.77
HERC1-215ENST00000561436 CTDSP1Q9GZU7 261 aa4□□□□□ -1.77
HERC1-215ENST00000561436 HCN3Q9P1Z3 774 aa4□□□□□ -1.77
HERC1-215ENST00000561436 FBXO2Q9UK22 296 aaPredicted RBP4□□□□□ -1.77
HERC1-215ENST00000561436 DTX4Q9Y2E6 619 aa4□□□□□ -1.77
HERC1-215ENST00000561436 C4AP0C0L4 1744 aa4□□□□□ -1.77
HERC1-215ENST00000561436 CEMIPQ8WUJ3 1361 aa4□□□□□ -1.77
HERC1-215ENST00000561436 CHD4Q14839 1912 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 COL3A1P02461 1466 aaPredicted RBP3.99□□□□□ -1.77
HERC1-215ENST00000561436 MRC1P22897 1456 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 ZNF541Q9H0D2 1346 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 WDR90Q96KV7 1748 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 RIC1Q4ADV7 1423 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 TTC36A6NLP5 189 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 TBX18O95935 607 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 LCKP06239 509 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 CHRM4P08173 479 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 CELA2AP08217 269 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 LYL1P12980 280 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 ATP1A3P13637 1013 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 ARSAP15289 507 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 ST6GAL1P15907 406 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 EPHB2P29323 1055 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 HNF1BP35680 557 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 GJC1P36383 396 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 TNNT2P45379 298 aaPredicted RBP3.99□□□□□ -1.77
HERC1-215ENST00000561436 CLNS1AP54105 237 aaKnown RBP3.99□□□□□ -1.77
HERC1-215ENST00000561436 NR1H2P55055 460 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 SRSF7Q16629 238 aaKnown RBP eCLIP3.99□□□□□ -1.77
HERC1-215ENST00000561436 AP5B1Q2VPB7 878 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 C5orf22Q49AR2 442 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 ARL13AQ5H913 290 aaPredicted RBP3.99□□□□□ -1.77
HERC1-215ENST00000561436 FAM69AQ5T7M9 428 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 FAM171A1Q5VUB5 890 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 GJB7Q6PEY0 223 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 PPP1R42Q7Z4L9 355 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 MDGA2Q7Z553 956 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 YTHDF3Q7Z739 585 aaKnown RBP3.99□□□□□ -1.77
HERC1-215ENST00000561436 PCGF5Q86SE9 256 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 SEMA6DQ8NFY4 1073 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 NFKBIDQ8NI38 313 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 BCAS4Q8TDM0 211 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 SAAL1Q96ER3 474 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 EYA3Q99504 573 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.99□□□□□ -1.77
HERC1-215ENST00000561436 ENTPD7Q9NQZ7 604 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 BABAM1Q9NWV8 329 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 KLHL13Q9P2N7 655 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 FBXO40Q9UH90 709 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 NIP7Q9Y221 180 aaKnown RBP eCLIP3.99□□□□□ -1.77
HERC1-215ENST00000561436 NUDCQ9Y266 331 aa3.99□□□□□ -1.77
HERC1-215ENST00000561436 ATP6V0A2Q9Y487 856 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms