RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 VSIG1Q86XK7 387 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 CAMK1DQ8IU85 385 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 LRRC49Q8IUZ0 686 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 PAF1Q8N7H5 531 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 RAB7BQ96AH8 199 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 ZNF830Q96NB3 372 aaPredicted RBP20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 MYOCQ99972 504 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 RTKNQ9BST9 563 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 SUV39H2Q9H5I1 410 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 ATP13A3Q9H7F0 1226 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 DTLQ9NZJ0 730 aa20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 ZFR2Q9UPR6 939 aaKnown RBP20.14■□□□□ 0.81
TSPAN3-210ENST00000561277 DCDC2BA2VCK2 349 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 MX2P20592 715 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 XPAP23025 273 aaPredicted RBP20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 SERPINA4P29622 427 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 CSNK1DP48730 415 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 MAXP61244 160 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 BNC1Q01954 994 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 BCL2L1Q07817 233 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 KIF5AQ12840 1032 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 IFI16Q16666 785 aaKnown RBP20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 ZNF284Q2VY69 593 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 KAZNQ674X7 775 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 SLC9A4Q6AI14 798 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 NAPEPLDQ6IQ20 393 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 TIGD7Q6NT04 549 aaPredicted RBP20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 TXLNBQ8N3L3 684 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 PGBD5Q8N414 524 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 CCNYQ8ND76 341 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 KRT35Q92764 455 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 TUBGCP5Q96RT8 1024 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 ZDHHC5Q9C0B5 715 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 GRPEL1Q9HAV7 217 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 NT5MQ9NPB1 228 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 FZD3Q9NPG1 666 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 DKK3Q9UBP4 350 aa20.13■□□□□ 0.81
TSPAN3-210ENST00000561277 SPINT1O43278 529 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 AP1G1O43747 822 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 HSPA9P38646 679 aaKnown RBP20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 NSUN2Q08J23 767 aaKnown RBP eCLIP20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 KIF19Q2TAC6 998 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 NPNTQ6UXI9 565 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 SPOCD1Q6ZMY3 1216 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 CCDC50Q8IVM0 306 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 CALR3Q96L12 384 aaKnown RBP20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 ZNF641Q96N77 438 aaPredicted RBP20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 MGME1Q9BQP7 344 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 SCUBE2Q9NQ36 999 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 DMTF1Q9Y222 760 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 CA5BQ9Y2D0 317 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 ANKRD6Q9Y2G4 727 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 SNX11Q9Y5W9 270 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 GOLGA6L3A6NEY3 463 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 WNT1P04628 370 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 KRT10P13645 584 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 TIMP2P16035 220 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 ITIH2P19823 946 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 KCNA4P22459 653 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 CD38P28907 300 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 NUDT1P36639 197 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 CDKN2BP42772 138 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 C21orf59P57076 290 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 AP1S1P61966 158 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 RPS21P63220 83 aaKnown RBP20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 KIAA1161Q6NSJ0 714 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 KATNAL2Q8IYT4 538 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 KIAA1524Q8TCG1 905 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 HDAC11Q96DB2 347 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 FEM1CQ96JP0 617 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 NSMCE3Q96MG7 304 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 LGMNQ99538 433 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 TTLL3Q9Y4R7 772 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 DOCK9Q9BZ29 2069 aa20.12■□□□□ 0.81
TSPAN3-210ENST00000561277 ANKRD36A6QL64 1941 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 GRID2IPA4D2P6 1211 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 VILLO15195 856 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 MATN3O15232 486 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 TSPAN6O43657 245 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 OPHN1O60890 802 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 NEBLO76041 1014 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 PRKCGP05129 697 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 ZFXP17010 805 aaPredicted RBP20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 CCNCP24863 283 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 ITKQ08881 620 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 TMEM259Q4ZIN3 620 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 BRAT1Q6PJG6 821 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 ZSWIM9Q86XI8 627 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 MAML1Q92585 1016 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 RBM41Q96IZ5 413 aaKnown RBP20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 TSGA13Q96PP4 275 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 NUDCD1Q96RS6 583 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 GAREM1Q9H706 876 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 IL21RQ9HBE5 538 aa20.11■□□□□ 0.81
TSPAN3-210ENST00000561277 TSPAN11A1L157 253 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 IGLON5A6NGN9 336 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 PRAMEF26H0Y7S4 382 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 KCNK3O14649 394 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms