RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SIX6OS1Q8N1H7 587 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 WNT8BQ93098 351 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 DHRS1Q96LJ7 313 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 GAD1Q99259 594 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 PSD2Q9BQI7 771 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 DCDC2Q9UHG0 476 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 H3BMQ9 156 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 ZBTB14O43829 449 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 NOL3O60936 208 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 GLDCP23378 1020 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 TKTL1P51854 596 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 MAP3K7CLP57077 242 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 RPL10AP62906 217 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 SEMA5AQ13591 1074 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 PCLAFQ15004 111 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 EGFLAMQ63HQ2 1017 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 CYS1Q717R9 158 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 LYSMD3Q7Z3D4 306 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 HACE1Q8IYU2 909 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 TMEM86AQ8N2M4 240 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 RNF139Q8WU17 664 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 HTR3CQ8WXA8 447 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 COG8Q96MW5 612 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 CDRT15Q96T59 188 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 DCUN1D5Q9BTE7 237 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 C1orf50Q9BV19 199 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 DRC3Q9H069 523 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 PARVBQ9HBI1 364 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 ZFYVE28Q9HCC9 887 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 CHST12Q9NRB3 414 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 TMPRSS4Q9NRS4 437 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 PNPOQ9NVS9 261 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 MIOSQ9NXC5 875 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 NCKIPSDQ9NZQ3 722 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 STAP1Q9ULZ2 295 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 PCDHB12Q9Y5F1 795 aa14.11□□□□□ -0.15
RABGGTA-220ENST00000560998 M0QYT0 321 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 ACOT8O14734 319 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 PFDN6O15212 129 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 AQP9O43315 295 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 MFSD11O43934 449 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 TADA2AO75478 443 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 RNASEH2AO75792 299 aaKnown RBP14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 ZMPSTE24O75844 475 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 CHRNA1P02708 482 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 THP07101 528 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 CSH1P0DML2 217 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 CSH2P0DML3 217 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 JAK1P23458 1154 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 PAX3P23760 479 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 PIK3R1P27986 724 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 PEX6Q13608 980 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 ATP1A4Q13733 1029 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 NR1D2Q14995 579 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 SYPL2Q5VXT5 272 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 CXCL17Q6UXB2 119 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 HFE2Q6ZVN8 426 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 FAM35AQ86V20 835 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 PACRGLQ8N7B6 248 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 LPPQ93052 612 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 DUS3LQ96G46 650 aaKnown RBP14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 SIGLEC10Q96LC7 697 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 LENG8Q96PV6 779 aaPredicted RBP14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 UHRF1Q96T88 793 aaPredicted RBP14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 CDH19Q9H159 772 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 GBA3Q9H227 469 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 TPK1Q9H3S4 243 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 COQ10BQ9H8M1 238 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 EMCNQ9ULC0 261 aa14.1□□□□□ -0.15
RABGGTA-220ENST00000560998 SYNJ2BP-COX16A0A087WUM0 186 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 A0A0A0MRY4 1105 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 HMX2A2RU54 273 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 TMEM114B3SHH9 223 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 NRP1O14786 923 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 AIM2O14862 343 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 H2AFYO75367 372 aaKnown RBP14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 ATE1O95260 518 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 FYNP06241 537 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 CTSHP09668 335 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 ALOX5P09917 674 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 CYBAP13498 195 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 LHX1P48742 406 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 CLCNKBP51801 687 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 N4BP2L1Q5TBK1 243 aaPredicted RBP14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 OGFOD2Q6N063 350 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 RGMBQ6NW40 437 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 UNC5AQ6ZN44 842 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 CPSF7Q8N684 471 aaKnown RBP14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 SPATA13Q96N96 652 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 KLHL32Q96NJ5 620 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 LGMNQ99538 433 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 SMOQ99835 787 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 EBNA1BP2Q99848 306 aaKnown RBP14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 TUBA1CQ9BQE3 449 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 ULBP1Q9BZM6 244 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 NACA2Q9H009 215 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 UPF3AQ9H1J1 476 aaKnown RBP14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 CXorf21Q9HAI6 301 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 MAN1C1Q9NR34 630 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 SMYD2Q9NRG4 433 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms