RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PLK1P53350 603 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 BFSP2Q13515 415 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 MAPRE2Q15555 327 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 IFNLR1Q8IU57 520 aaPredicted RBP16.64■□□□□ 0.25
TPM1-228ENST00000560975 CMTR2Q8IYT2 770 aaKnown RBP16.64■□□□□ 0.25
TPM1-228ENST00000560975 TXNDC5Q8NBS9 432 aaKnown RBP16.64■□□□□ 0.25
TPM1-228ENST00000560975 MAGEE2Q8TD90 523 aaPredicted RBP16.64■□□□□ 0.25
TPM1-228ENST00000560975 TRAPPC12Q8WVT3 735 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 TRUB1Q8WWH5 349 aaKnown RBP16.64■□□□□ 0.25
TPM1-228ENST00000560975 NDRG1Q92597 394 aaKnown RBP16.64■□□□□ 0.25
TPM1-228ENST00000560975 MAELQ96JY0 434 aaKnown RBP16.64■□□□□ 0.25
TPM1-228ENST00000560975 OSBPL2Q9H1P3 480 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 FBRSL1Q9HCM7 1045 aaKnown RBP16.64■□□□□ 0.25
TPM1-228ENST00000560975 DGKBQ9Y6T7 804 aa16.64■□□□□ 0.25
TPM1-228ENST00000560975 KDM1AO60341 852 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 TOMM70O94826 608 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 STAG3L1P0CL83 205 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 NCAM1P13591 858 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 CSE1LP55060 971 aaKnown RBP16.63■□□□□ 0.25
TPM1-228ENST00000560975 SQLEQ14534 574 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 ZNF280DQ6N043 979 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 FAM117BQ6P1L5 589 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 ZNF354CQ86Y25 554 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 RNF135Q8IUD6 432 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 DUS3LQ96G46 650 aaKnown RBP16.63■□□□□ 0.25
TPM1-228ENST00000560975 CYP3A43Q9HB55 503 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 CCM2LQ9NUG4 571 aaPredicted RBP16.63■□□□□ 0.25
TPM1-228ENST00000560975 ARMC1Q9NVT9 282 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 UBR3Q6ZT12 1888 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 FER1L6Q2WGJ9 1857 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 TSPAN8P19075 237 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 FASP25445 335 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 ZBTB17Q13105 803 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 PPIL2Q13356 520 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 SLC12A1Q13621 1099 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 TMEM214Q6NUQ4 689 aaKnown RBP16.63■□□□□ 0.25
TPM1-228ENST00000560975 FAM35AQ86V20 835 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 ZC3HC1Q86WB0 502 aaKnown RBP16.63■□□□□ 0.25
TPM1-228ENST00000560975 CEP97Q8IW35 865 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 DHRSXQ8N5I4 330 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 NAT16Q8N8M0 369 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 SEPT8Q92599 483 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 ITPKCQ96DU7 683 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 GPR22Q99680 433 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 MINDY3Q9H8M7 445 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 GIN1Q9NXP7 522 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 ACOT9Q9Y305 439 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 TCAF1Q9Y4C2 921 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 USP3Q9Y6I4 520 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 HCRTO43612 131 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 IL18RAPO95256 599 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 PGK1P00558 417 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 IL10P22301 178 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 POU5F1BQ06416 359 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 CTBP1Q13363 440 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 CAPRIN1Q14444 709 aaKnown RBP16.63■□□□□ 0.25
TPM1-228ENST00000560975 INTS11Q5TA45 600 aaKnown RBP16.63■□□□□ 0.25
TPM1-228ENST00000560975 CCDC80Q76M96 950 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 PSTKQ8IV42 348 aaKnown RBP16.63■□□□□ 0.25
TPM1-228ENST00000560975 SCAIQ8N9R8 606 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 HPS1Q92902 700 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 MPHOSPH6Q99547 160 aaKnown RBP16.63■□□□□ 0.25
TPM1-228ENST00000560975 DNAI2Q9GZS0 605 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 PTPRHQ9HD43 1115 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 RIC8BQ9NVN3 520 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 IFT80Q9P2H3 777 aaPredicted RBP16.63■□□□□ 0.25
TPM1-228ENST00000560975 SARDHQ9UL12 918 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 TRPC5Q9UL62 973 aaPredicted RBP16.63■□□□□ 0.25
TPM1-228ENST00000560975 ANKRD6Q9Y2G4 727 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 SLC27A5Q9Y2P5 690 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 V9GYQ6 96 aa16.63■□□□□ 0.25
TPM1-228ENST00000560975 TARM1B6A8C7 271 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 SNAP29O95721 258 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 MMP10P09238 476 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 ELK4P28324 431 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 YBX1P67809 324 aaKnown RBP16.62■□□□□ 0.25
TPM1-228ENST00000560975 MPP1Q00013 466 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 KCNC4Q03721 635 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 C6orf183Q5T699 404 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 DENND6AQ8IWF6 608 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 TERB1Q8NA31 727 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 GLT1D1Q96MS3 346 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 C1orf50Q9BV19 199 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 NANOGQ9H9S0 305 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 ATAD3AQ9NVI7 634 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 NME4O00746 187 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 AQP9O43315 295 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 PRKAA2P54646 552 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 ZIK1Q3SY52 487 aaPredicted RBP16.62■□□□□ 0.25
TPM1-228ENST00000560975 ZNF618Q5T7W0 954 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 TMEM110Q86TL2 294 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 RETREG3Q86VR2 466 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 IFNEQ86WN2 208 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 DDIASQ8IXT1 998 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 HDAC10Q969S8 669 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 MRPL45Q9BRJ2 306 aaKnown RBP16.62■□□□□ 0.25
TPM1-228ENST00000560975 C9orf16Q9BUW7 83 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 SLC25A23Q9BV35 468 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 FTHL17Q9BXU8 183 aa16.62■□□□□ 0.25
TPM1-228ENST00000560975 AGPAT4Q9NRZ5 378 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms