RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 SHC3Q92529 594 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 SENP6Q9GZR1 1112 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 MKL2Q9ULH7 1088 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 MRPS7Q9Y2R9 242 aaKnown RBP13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 SPHKAPQ2M3C7 1700 aa13.31□□□□□ -0.28
CSPG4P11-201ENST00000560634 LMTK2Q8IWU2 1503 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 ADCY6O43306 1168 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 SERPINB7O75635 380 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 WFS1O76024 890 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 POLR2EP19388 210 aaKnown RBP13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 BDNFP23560 247 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 APTXQ7Z2E3 356 aaKnown RBP13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 PROSER1Q86XN7 944 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 NELL1Q92832 810 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 FAM163AQ96GL9 167 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 CRISPLD1Q9H336 500 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 MFHAS1Q9Y4C4 1052 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 TRPV2Q9Y5S1 764 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 NRXN1Q9ULB1 1477 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 A0A087X0B3 334 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 ANKRD63C9JTQ0 380 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 IDH3BO43837 385 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 SHBGP04278 402 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 CES1P23141 567 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 UGT2B15P54855 530 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 KCNJ2P63252 427 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 MFSD10Q14728 455 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 ZIK1Q3SY52 487 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 POTEHQ6S545 545 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 AGMOQ6ZNB7 445 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 RD3Q7Z3Z2 195 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 SLC41A1Q8IVJ1 513 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 ZBTB45Q96K62 511 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 TEFMQ96QE5 360 aaKnown RBP13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 SLC12A4Q9UP95 1085 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 TNFSF13BQ9Y275 285 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 EML1O00423 815 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 MAGEC1O60732 1142 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 PGM3O95394 542 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 ITGA2BP08514 1039 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 AKR1A1P14550 325 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 CCNB1P14635 433 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 FSCN1Q16658 493 aaKnown RBP13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 SNRNP25Q9BV90 132 aaKnown RBP13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 WDR12Q9GZL7 423 aaKnown RBP13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 NDOR1Q9UHB4 597 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 SSR3Q9UNL2 185 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 COG5Q9UP83 839 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 IRAK3Q9Y616 596 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 CHURC1-FNTBB4DL54 471 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 AZIN1O14977 448 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 CST1P01037 141 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 MYL9P24844 172 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 HNRNPH3P31942 346 aaKnown RBP13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 ACLYP53396 1101 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 TRIM32Q13049 653 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 SUSD6Q92537 303 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 DGCR14Q96DF8 476 aaKnown RBP13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 COX4I2Q96KJ9 171 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 FBXO5Q9UKT4 447 aa13.3□□□□□ -0.28
CSPG4P11-201ENST00000560634 AK9Q5TCS8 1911 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 IRGMA1A4Y4 181 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 OPLAHO14841 1288 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 RECQL4O94761 1208 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 GJB6O95452 261 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 HLA-DQA2P01906 255 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 KLRC2P26717 231 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 SLC39A12Q504Y0 691 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 SWT1Q5T5J6 900 aaKnown RBP13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 TBC1D21Q8IYX1 336 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 ELMO1Q92556 727 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 HOPXQ9BPY8 73 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 SLC4A5Q9BY07 1137 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 PRDM12Q9H4Q4 367 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 SAMHD1Q9Y3Z3 626 aaKnown RBP13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 BBIP1A8MTZ0 92 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 SSNA1O43805 119 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 EDF1O60869 148 aaKnown RBP13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 PRKAG1P54619 331 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 PTPRNQ16849 979 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 C15orf59Q2T9L4 293 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 ALG11Q2TAA5 492 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 NBPF12Q5TAG4 269 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 DDI2Q5TDH0 399 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 IQSEC1Q6DN90 963 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 GALNT18Q6P9A2 607 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 ZC3H7AQ8IWR0 971 aaKnown RBP13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 PGLYRP2Q96PD5 576 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 IDI2Q9BXS1 227 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 GBA2Q9HCG7 927 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 TMEM138Q9NPI0 162 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 FBXO6Q9NRD1 293 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 MAGEL2Q9UJ55 1249 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 AP4B1Q9Y6B7 739 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 ATXN2Q99700 1313 aaKnown RBP13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 URADA6NGE7 173 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 NR2F1P10589 423 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 CD86P42081 329 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms