RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 OR6K2Q8NGY2 324 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 ZNF564Q8TBZ8 553 aaPredicted RBP18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 C1orf74Q96LT6 269 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 OSBPL1AQ9BXW6 950 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 ACP6Q9NPH0 428 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 PNMA8BQ9ULN7 279 aaPredicted RBP18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 DOCK4Q8N1I0 1966 aa18.07■□□□□ 0.48
TSPAN3-208ENST00000560514 UGT2B4P06133 528 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 GEMIN4P57678 1058 aaKnown RBP18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 RNASE9P60153 205 aaKnown RBP18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 SNRPD1P62314 119 aaKnown RBP18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 ARF5P84085 180 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 GNA12Q03113 381 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 DEUP1Q05D60 604 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 PHF19Q5T6S3 580 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 ENPP7Q6UWV6 458 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 OLFML1Q6UWY5 402 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 SLC26A9Q7LBE3 791 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 PLPP6Q8IY26 295 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 ZNF683Q8IZ20 524 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 FMR1NBQ8N0W7 255 aaPredicted RBP18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 ATL2Q8NHH9 583 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 SMARCE1Q969G3 411 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 TSACCQ96A04 125 aaPredicted RBP18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 ISG20Q96AZ6 181 aaKnown RBP18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 FAM81BQ96LP2 452 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 EPAS1Q99814 870 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 FUCA2Q9BTY2 467 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 TMEM51Q9NW97 253 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 FOXJ2Q9P0K8 574 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 CHD5Q8TDI0 1954 aa18.06■□□□□ 0.48
TSPAN3-208ENST00000560514 GOLGA6L4A6NEF3 574 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 MMP20O60882 483 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 ZMPSTE24O75844 475 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 GKP32189 559 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 ETFBP38117 255 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 PEX5P50542 639 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 ATP1A2P50993 1020 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 SKIDA1Q1XH10 827 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 ELOA2Q8IYF1 753 aaPredicted RBP18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 SPATA20Q8TB22 786 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 HTR3CQ8WXA8 447 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 DHTKD1Q96HY7 919 aaPredicted RBP18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 TIGD1Q96MW7 591 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 KLHL32Q96NJ5 620 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 ZYG11BQ9C0D3 744 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 EPN3Q9H201 632 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 ANLNQ9NQW6 1124 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 MBNL1Q9NR56 388 aaKnown RBP18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 HOOK1Q9UJC3 728 aaKnown RBP18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 HPCAL4Q9UM19 191 aa18.05■□□□□ 0.48
TSPAN3-208ENST00000560514 IGLV3-10A0A075B6K4 115 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 STMND1H3BQB6 276 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 POP4O95707 220 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 GLB1P16278 677 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 WT1P19544 449 aaPredicted RBP18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 CR2P20023 1033 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 XPAP23025 273 aaPredicted RBP18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 PPP1R2P41236 205 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 RAD51Q06609 339 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 ZFP36L1Q07352 338 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 KCNAB2Q13303 367 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 SERINC3Q13530 473 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 ARHGEF7Q14155 803 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 ARHGAP44Q17R89 818 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 KLHL40Q2TBA0 621 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 DTX1Q86Y01 620 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 ZDHHC17Q8IUH5 632 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 DRC7Q8IY82 874 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 WDTC1Q8N5D0 677 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 C1orf131Q8NDD1 294 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 OR2AP1Q8NGE2 309 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 NPY6RQ99463 290 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 KLQ9UEF7 1012 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 RNF215Q9Y6U7 377 aa18.04■□□□□ 0.48
TSPAN3-208ENST00000560514 ZFC3H1O60293 1989 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 AREL1O15033 823 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 GSRP00390 522 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 TNFP01375 233 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 ERBB2P04626 1255 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 KRT9P35527 623 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 ETV5P41161 510 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 SRP54P61011 504 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 C1QBPQ07021 282 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 LRRC14Q15048 493 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 IRF4Q15306 451 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 ALG11Q2TAA5 492 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 MAP9Q49MG5 647 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 C4orf17Q53FE4 359 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 LRRC73Q5JTD7 316 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 TP53I13Q8NBR0 393 aaPredicted RBP18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 ZNF397Q8NF99 534 aaPredicted RBP18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 JPH3Q8WXH2 748 aaPredicted RBP18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 WRAP53Q9BUR4 548 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 GDPD2Q9HCC8 539 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 ANAPC2Q9UJX6 822 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 APPL1Q9UKG1 709 aa18.03■□□□□ 0.48
TSPAN3-208ENST00000560514 PCDHGC3Q9UN70 934 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms