RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 TRABD2BA6NFA1 517 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 IGLON5A6NGN9 336 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 AREL1O15033 823 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 SCAMP1O15126 338 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 PRAMEF11O60813 436 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 SDC3O75056 442 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 CSF2P04141 144 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 HSPA9P38646 679 aaKnown RBP14.25□□□□□ -0.13
TPM1-223ENST00000560445 CSNK1DP48730 415 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 PDE1CQ14123 709 aaPredicted RBP14.25□□□□□ -0.13
TPM1-223ENST00000560445 PIGHQ14442 188 aaPredicted RBP14.25□□□□□ -0.13
TPM1-223ENST00000560445 BOLA3Q53S33 107 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 ATXN7L2Q5T6C5 722 aaPredicted RBP14.25□□□□□ -0.13
TPM1-223ENST00000560445 HES3Q5TGS1 186 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 ZCCHC8Q6NZY4 707 aaKnown RBP14.25□□□□□ -0.13
TPM1-223ENST00000560445 RFX8Q6ZV50 586 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 FAM181AQ8N9Y4 354 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 NSMCE1Q8WV22 266 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 RFFLQ8WZ73 363 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 CINPQ9BW66 212 aaPredicted RBP14.25□□□□□ -0.13
TPM1-223ENST00000560445 NRSN2Q9GZP1 204 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 LRRC19Q9H756 370 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 SCUBE2Q9NQ36 999 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 GPR27Q9NS67 375 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 SPASTQ9UBP0 616 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 CA5BQ9Y2D0 317 aa14.25□□□□□ -0.13
TPM1-223ENST00000560445 CFAP69A5D8W1 941 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 SIGLEC6O43699 453 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 PALMO75781 387 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 CKMT1AP12532 417 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 HTR1BP28222 390 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 SERPINB6P35237 376 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 ABL2P42684 1182 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 CLDN2P57739 230 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 DNAJC3Q13217 504 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 PPP6R3Q5H9R7 873 aaPredicted RBP14.24□□□□□ -0.13
TPM1-223ENST00000560445 ZNF571Q7Z3V5 609 aaPredicted RBP14.24□□□□□ -0.13
TPM1-223ENST00000560445 SDR16C5Q8N3Y7 309 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 TPCN2Q8NHX9 752 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 SCG3Q8WXD2 468 aaKnown RBP14.24□□□□□ -0.13
TPM1-223ENST00000560445 GRAMD1AQ96CP6 724 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 ZNF599Q96NL3 588 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 ANP32EQ9BTT0 268 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 SNRNP25Q9BV90 132 aaKnown RBP14.24□□□□□ -0.13
TPM1-223ENST00000560445 SLC13A1Q9BZW2 595 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 NOL6Q9H6R4 1146 aaKnown RBP14.24□□□□□ -0.13
TPM1-223ENST00000560445 KCTD5Q9NXV2 234 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 TAS2R14Q9NYV8 317 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 CLCA2Q9UQC9 943 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 APC2O95996 2303 aa14.24□□□□□ -0.13
TPM1-223ENST00000560445 PLXNB3Q9ULL4 1909 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 DOCK9Q9BZ29 2069 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 TSPAN11A1L157 253 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 SYCE3A1L190 88 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 TPP1O14773 563 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 FFAR2O15552 330 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 SERPING1P05155 500 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 KRT10P13645 584 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 MIPP30301 263 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 PEX5P50542 639 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 UBASH3AP57075 661 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 PFN3P60673 137 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 AP1S1P61966 158 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 ZBED6P86452 979 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 IL10RBQ08334 325 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 NSUN2Q08J23 767 aaKnown RBP eCLIP14.23□□□□□ -0.13
TPM1-223ENST00000560445 NR1I3Q14994 352 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 SKOR2Q2VWA4 1001 aaPredicted RBP14.23□□□□□ -0.13
TPM1-223ENST00000560445 TMEM52BQ4KMG9 183 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 TMCO3Q6UWJ1 677 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 LEKR1Q6ZMV7 388 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 MACC1Q6ZN28 852 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 SLC22A18ASQ8N1D0 253 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 SLC25A45Q8N413 288 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 FSTL5Q8N475 847 aaPredicted RBP14.23□□□□□ -0.13
TPM1-223ENST00000560445 ZNF548Q8NEK5 533 aaPredicted RBP14.23□□□□□ -0.13
TPM1-223ENST00000560445 WDR48Q8TAF3 677 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 NAT6Q93015 286 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 BMFQ96LC9 184 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 KLF6Q99612 283 aaPredicted RBP14.23□□□□□ -0.13
TPM1-223ENST00000560445 IL12RB2Q99665 862 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.23□□□□□ -0.13
TPM1-223ENST00000560445 ABCG4Q9H172 646 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 ISCUQ9H1K1 167 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 SUV39H2Q9H5I1 410 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 PDFQ9HBH1 243 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 LHX3Q9UBR4 397 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 SEPT3Q9UH03 358 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 PCSK1NQ9UHG2 260 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 IP6K2Q9UHH9 426 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 SALL4Q9UJQ4 1053 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 LHX6Q9UPM6 363 aa14.23□□□□□ -0.13
TPM1-223ENST00000560445 ARID1BQ8NFD5 2236 aaPredicted RBP14.23□□□□□ -0.13
TPM1-223ENST00000560445 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.22□□□□□ -0.13
TPM1-223ENST00000560445 POM121BA6NF01 834 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 DFFAO00273 331 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 DDX3XO00571 662 aaKnown RBP eCLIP14.22□□□□□ -0.132e-8■■■■□ 19.9
TPM1-223ENST00000560445 TRIM38O00635 465 aa14.22□□□□□ -0.13
TPM1-223ENST00000560445 RRP8O43159 456 aaKnown RBP14.22□□□□□ -0.13
TPM1-223ENST00000560445 AQP9O43315 295 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms