RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PARGQ86W56 976 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 SLC22A18ASQ8N1D0 253 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 SLC25A45Q8N413 288 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 TRIM58Q8NG06 486 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 ASB12Q8WXK4 309 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 KLK6Q92876 244 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 ARHGEF26Q96DR7 871 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 FEM1CQ96JP0 617 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 UBL7Q96S82 380 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-214ENST00000560402 OSBPL1AQ9BXW6 950 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 OSBPL2Q9H1P3 480 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 ZDHHC6Q9H6R6 413 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 FZD3Q9NPG1 666 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 TMEM248Q9NWD8 314 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 NCKIPSDQ9NZQ3 722 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 FADS3Q9Y5Q0 445 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 PTPRQQ9UMZ3 2332 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 ZSCAN5CA6NGD5 496 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-214ENST00000560402 EIF4E1BA6NMX2 242 aaKnown RBP13.78□□□□□ -0.2
SMAD3-214ENST00000560402 SCAMP1O15126 338 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 CTIFO43310 598 aaKnown RBP13.78□□□□□ -0.2
SMAD3-214ENST00000560402 TSPAN6O43657 245 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 TLX3O43711 291 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-214ENST00000560402 GSRP00390 522 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 NME1P15531 152 aaKnown RBP13.78□□□□□ -0.2
SMAD3-214ENST00000560402 ACTN2P35609 894 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 SOX5P35711 763 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 ARHGAP25P42331 645 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 ATP11AP98196 1134 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 SEMG2Q02383 582 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 POLD3Q15054 466 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-214ENST00000560402 C2CD6Q53TS8 623 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 Q6ZSR6 202 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 NLRP14Q86W24 1093 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 RNF10Q8N5U6 811 aaKnown RBP13.78□□□□□ -0.2
SMAD3-214ENST00000560402 EMC1Q8N766 993 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 CEP112Q8N8E3 955 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 FAM181AQ8N9Y4 354 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 CPA5Q8WXQ8 436 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 ARHGEF2Q92974 986 aaKnown RBP13.78□□□□□ -0.2
SMAD3-214ENST00000560402 NTAN1Q96AB6 310 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 TBC1D31Q96DN5 1066 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 LENG8Q96PV6 779 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-214ENST00000560402 DEPDC7Q96QD5 511 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 SLC17A9Q9BYT1 436 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 MAGEH1Q9H213 219 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 UCKL1Q9NWZ5 548 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 OR12D3Q9UGF7 316 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 HPCAL4Q9UM19 191 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 FCF1Q9Y324 198 aaKnown RBP13.78□□□□□ -0.2
SMAD3-214ENST00000560402 REXO2Q9Y3B8 237 aaKnown RBP13.78□□□□□ -0.2
SMAD3-214ENST00000560402 SHROOM3Q8TF72 1996 aa13.78□□□□□ -0.2
SMAD3-214ENST00000560402 SPTY2D1-AS1A0A0U1RR47 76 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 C2CD4BA6NLJ0 364 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 FPGTO14772 594 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 FFAR2O15552 330 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 PJA2O43164 708 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 LZTS3O60299 673 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-214ENST00000560402 BRINP1O60477 761 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 RAMP2O60895 175 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 MT-CO3P00414 261 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 CSF2P04141 144 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 GIMD1P0DJR0 217 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 ADRA1BP35368 520 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 DNA2P51530 1060 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 JAM2P57087 298 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 CLDN2P57739 230 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 SNRPD1P62314 119 aaKnown RBP13.77□□□□□ -0.21
SMAD3-214ENST00000560402 FMO1Q01740 532 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 CDO1Q16878 200 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 WHAMMP3Q1A5X7 153 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 TBC1D25Q3MII6 688 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 ZNF805Q5CZA5 627 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 HGSNATQ68CP4 663 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 RWDD4Q6NW29 188 aaKnown RBP13.77□□□□□ -0.21
SMAD3-214ENST00000560402 ZCCHC8Q6NZY4 707 aaKnown RBP13.77□□□□□ -0.21
SMAD3-214ENST00000560402 SLC35F6Q8N357 371 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 OR2AP1Q8NGE2 309 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 RXFP2Q8WXD0 754 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 CASKIN2Q8WXE0 1202 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 FGF11Q92914 225 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 TBATAQ96M53 351 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 WDR24Q96S15 920 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 C11orf70Q9BRQ4 267 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 TM6SF2Q9BZW4 377 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 DNAJC28Q9NX36 388 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 HECAQ9UBI9 543 aaPredicted RBP13.77□□□□□ -0.21
SMAD3-214ENST00000560402 NEU3Q9UQ49 428 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 CSNK1G3Q9Y6M4 447 aa13.77□□□□□ -0.21
SMAD3-214ENST00000560402 C16orf96A6NNT2 1141 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 RNF103O00237 685 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 TOR1BO14657 336 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 CD160O95971 181 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 PLEKP08567 350 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-214ENST00000560402 ACVRL1P37023 503 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 ABL2P42684 1182 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 NSFP46459 744 aaKnown RBP13.76□□□□□ -0.21
SMAD3-214ENST00000560402 CKAP4Q07065 602 aaKnown RBP13.76□□□□□ -0.21
SMAD3-214ENST00000560402 SGCGQ13326 291 aa13.76□□□□□ -0.21
SMAD3-214ENST00000560402 FGL2Q14314 439 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms