RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 WASH4PA8MWX3 477 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 EIF3CLB5ME19 914 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 RASA4BC9J798 803 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 AREL1O15033 823 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 RASA4O43374 803 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 BRINP1O60477 761 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 NEBLO76041 1014 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 GIMD1P0DJR0 217 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 TNFAIP3P21580 790 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 ABL2P42684 1182 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 BLKP51451 505 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 PFN3P60673 137 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 SERINC3Q13530 473 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 ATXN7L2Q5T6C5 722 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 FAXCQ5TGI0 409 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 MON1BQ7L1V2 547 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 PYROXD2Q8N2H3 581 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 IFI44Q8TCB0 444 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 LMX1AQ8TE12 382 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 TBATAQ96M53 351 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 ZNF578Q96N58 590 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 MCEEQ96PE7 176 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 EIF3CQ99613 913 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 MAGEB5Q9BZ81 275 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 PARVAQ9NVD7 372 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 FZD10Q9ULW2 581 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 MYO6Q9UM54 1294 aa13.78□□□□□ -0.2
SNRPA1-204ENST00000558020 CPED1A4D0V7 1026 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 DAPK3O43293 454 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 CCP110O43303 1012 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 MMP20O60882 483 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 HTR1BP28222 390 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 PEX5P50542 639 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 NDST2P52849 883 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 TPI1P60174 286 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 RPL7AP62424 266 aaKnown RBP13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 NR0B2Q15466 257 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 CDKN3Q16667 212 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 TBC1D25Q3MII6 688 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 CDCP2Q5VXM1 449 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 ERAP2Q6P179 960 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 VPS36Q86VN1 386 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 DNAAF5Q86Y56 855 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 MCOLN2Q8IZK6 566 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 WDR48Q8TAF3 677 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 HMCESQ96FZ2 354 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 ZNF641Q96N77 438 aaPredicted RBP13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 UBL7Q96S82 380 aaPredicted RBP13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 UBA2Q9UBT2 640 aaPredicted RBP13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 NEU3Q9UQ49 428 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 ITM2BQ9Y287 266 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 BAHCC1Q9P281 2608 aa13.77□□□□□ -0.21
SNRPA1-204ENST00000558020 CHD5Q8TDI0 1954 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 ARHGAP42A6NI28 874 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 LMO7DNF2Z398 122 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 TLX3O43711 291 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 USP12O75317 370 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 CSO75390 466 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 RNF8O76064 485 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 MBD3O95983 291 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 ANXA6P08133 673 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 TIMP2P16035 220 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 ITPKBP27987 946 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 EIF4A3P38919 411 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 LSSP48449 732 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 PPARDQ03181 441 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 LRRC14Q15048 493 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 KLHL40Q2TBA0 621 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 DEFB133Q30KQ1 61 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 FILIP1LQ4L180 1135 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 PRRT3Q5FWE3 981 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 BROXQ5VW32 411 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 ESRP1Q6NXG1 681 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 BRAT1Q6PJG6 821 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 SDR16C5Q8N3Y7 309 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 PAF1Q8N7H5 531 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 ZNF248Q8NDW4 579 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 ATL2Q8NHH9 583 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 NAT6Q93015 286 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 WRAP53Q9BUR4 548 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 SUV39H2Q9H5I1 410 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 NOL6Q9H6R4 1146 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 POLR1BQ9H9Y6 1135 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 APOBEC3BQ9UH17 382 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 GGT7Q9UJ14 662 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 DOLKQ9UPQ8 538 aa13.76□□□□□ -0.21
SNRPA1-204ENST00000558020 TCRBV5S1A1TA0A578 114 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 EME2A4GXA9 379 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 TK2O00142 265 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 SPINT1O43278 529 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 ALPIP09923 528 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 MYF5P13349 255 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 CTSEP14091 401 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 RBMS1P29558 406 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 ADKP55263 362 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 PCBP4P57723 403 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 ERVPABLB-1P60509 514 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 POLR2LP62875 67 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 EIF2B5Q13144 721 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 ELOCQ15369 112 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms