RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 H2AFJQ9BTM1 129 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 EFHD1Q9BUP0 239 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 GLIS2Q9BZE0 524 aaPredicted RBP1.81□□□□□ -2.12
HIF1A-212ENST00000557538 GHITMQ9H3K2 345 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 PLSCR4Q9NRQ2 329 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 TUBA8Q9NY65 449 aaPredicted RBP1.81□□□□□ -2.12
HIF1A-212ENST00000557538 MARCH4Q9P2E8 410 aaPredicted RBP1.81□□□□□ -2.12
HIF1A-212ENST00000557538 NLKQ9UBE8 527 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 SLC25A13Q9UJS0 675 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 DHDHQ9UQ10 334 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 EXO1Q9UQ84 846 aaKnown RBP1.81□□□□□ -2.12
HIF1A-212ENST00000557538 CARD8Q9Y2G2 431 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 NFE2L3Q9Y4A8 694 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 PSAT1Q9Y617 370 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 ARHGEF40Q8TER5 1519 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 BICDL2A1A5D9 508 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 PABPN1LA6NDY0 278 aaKnown RBP1.81□□□□□ -2.12
HIF1A-212ENST00000557538 TULP2O00295 520 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 SYN3O14994 580 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 TGFB1I1O43294 461 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 FGBP02675 491 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 HOXD13P35453 343 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 SELENOVP59797 346 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 OLR1P78380 273 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 MTX1Q13505 466 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 TAF11Q15544 211 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 USP41Q3LFD5 358 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 SLC10A5Q5PT55 438 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 C6orf141Q5SZD1 244 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 RPAINQ86UA6 219 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 NKAIN3Q8N8D7 197 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 GIMAP1Q8WWP7 306 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 TMPRSS5Q9H3S3 457 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 RIOX1Q9H6W3 641 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 FZD3Q9NPG1 666 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 C20orf141Q9NUB4 165 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 ARL15Q9NXU5 204 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 MORF4L1Q9UBU8 362 aa1.81□□□□□ -2.12
HIF1A-212ENST00000557538 IPO11Q9UI26 975 aaKnown RBP1.81□□□□□ -2.12
HIF1A-212ENST00000557538 A0A0A0MQY5 61 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 MSI1O43347 362 aaKnown RBP1.8□□□□□ -2.12
HIF1A-212ENST00000557538 KLK8O60259 260 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ZBED4O75132 1171 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 MT-CYBP00156 380 aaPredicted RBP1.8□□□□□ -2.12
HIF1A-212ENST00000557538 PCNAP12004 261 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ATP1A3P13637 1013 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 DPP6P42658 865 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ALDH7A1P49419 539 aaKnown RBP1.8□□□□□ -2.12
HIF1A-212ENST00000557538 RARSP54136 660 aaKnown RBP1.8□□□□□ -2.12
HIF1A-212ENST00000557538 HDAC4P56524 1084 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 YPEL5P62699 121 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ZNF268Q14587 947 aaPredicted RBP1.8□□□□□ -2.12
HIF1A-212ENST00000557538 MEA1Q16626 185 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ME3Q16798 604 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 CEP78Q5JTW2 689 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 PMS2CLQ68D20 193 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 SLC18B1Q6NT16 456 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 RRM2BQ7LG56 351 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 MAATS1Q7Z4T9 603 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ARHGEF25Q86VW2 580 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 MMP21Q8N119 569 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 TTC30BQ8N4P2 665 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 RSPH1Q8WYR4 309 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 USP6NLQ92738 828 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 RNF183Q96D59 192 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 SLC41A2Q96JW4 573 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 FAM210AQ96ND0 272 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 DACH2Q96NX9 599 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 CHCHD6Q9BRQ6 235 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ITPAQ9BY32 194 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 PDZD7Q9H5P4 517 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 SCPEP1Q9HB40 452 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ZNF304Q9HCX3 659 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 NKIRAS2Q9NYR9 191 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 KIF16BQ96L93 1317 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 PEG3Q9GZU2 1588 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 FRMD3A2A2Y4 597 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 DPPA5A6NC42 116 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 GOLGA6L9A6NEM1 432 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 NPIPB11E5RHQ5 1161 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 SMIM22K7EJ46 135 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 GAGE7O76087 117 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 NDUFB4O95168 129 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 OR2C1O95371 312 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 NUDT3O95989 172 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 TOMM40O96008 361 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 GAGE12FP0CL80 117 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 GAGE12GP0CL81 117 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 GAGE12IP0CL82 117 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 SRD5A1P18405 259 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 IL11P20809 199 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 MAOAP21397 527 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 HOXC9P31274 260 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 FMO4P31512 558 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 TNFSF8P32971 234 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 PAFAH1B1P43034 410 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 CCR9P51686 369 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 HMGA2P52926 109 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ARSFP54793 590 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 C21orf58P58505 322 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms