RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 PRR11Q96HE9 360 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-231ENST00000557336 C11orf70Q9BRQ4 267 aa11.33□□□□□ -0.6
HNRNPC-231ENST00000557336 MAGEH1Q9H213 219 aa11.33□□□□□ -0.6
HNRNPC-231ENST00000557336 VPS16Q9H269 839 aa11.33□□□□□ -0.6
HNRNPC-231ENST00000557336 ASCL3Q9NQ33 180 aa11.33□□□□□ -0.6
HNRNPC-231ENST00000557336 MBNL1Q9NR56 388 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-231ENST00000557336 CSNK1G3Q9Y6M4 447 aa11.33□□□□□ -0.6
HNRNPC-231ENST00000557336 RP1P56715 2156 aa11.33□□□□□ -0.6
HNRNPC-231ENST00000557336 SHROOM3Q8TF72 1996 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 KRIT1O00522 736 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 PES1O00541 588 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 INSIG1O15503 277 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 RRP8O43159 456 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 KDELR3O43731 214 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 USP12O75317 370 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 CSO75390 466 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 GSRP00390 522 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 TIMP2P16035 220 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 SDC4P31431 198 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 ACTN2P35609 894 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 SOX5P35711 763 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 IGFALSP35858 605 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 LSSP48449 732 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 GSCP56915 257 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 POLR2FP61218 127 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 PDE1CQ14123 709 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 ISXQ2M1V0 245 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 PERM1Q5SV97 790 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 RWDD4Q6NW29 188 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 WDR59Q6PJI9 974 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 LRRC69Q6ZNQ3 347 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 PARGQ86W56 976 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 ENOX1Q8TC92 643 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 IFI44Q8TCB0 444 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 FAM172AQ8WUF8 416 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 NTAN1Q96AB6 310 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 RAB7BQ96AH8 199 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 KLHL32Q96NJ5 620 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 FCRL3Q96P31 734 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 CLPBQ9H078 707 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 RETREG1Q9H6L5 497 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 NLRC4Q9NPP4 1024 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 FAM207AQ9NSI2 230 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 CHMP5Q9NZZ3 219 aa11.32□□□□□ -0.6
HNRNPC-231ENST00000557336 EME2A4GXA9 379 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 NEMP2A6NFY4 417 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 FPGTO14772 594 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 AQP9O43315 295 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 MMP20O60882 483 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 RAMP2O60895 175 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 TMCC1O94876 653 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 POP4O95707 220 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 CELA2BP08218 269 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 ALPPL2P10696 532 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 JUNDP17535 347 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 GABREP78334 506 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 SKOR1P84550 965 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 SGCGQ13326 291 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 C1orf61Q13536 156 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 POLD3Q15054 466 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 CYTH1Q15438 398 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 CDKN3Q16667 212 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 CLEC16AQ2KHT3 1053 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 DEFB133Q30KQ1 61 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 CT47A1Q5JQC4 288 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 KCTD16Q68DU8 428 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 ZCCHC8Q6NZY4 707 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 GDPD4Q6W3E5 623 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 APTXQ7Z2E3 356 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 PHF13Q86YI8 300 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 SLC35F3Q8IY50 421 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 TP53I13Q8NBR0 393 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 MSANTD4Q8NCY6 345 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 DENND6BQ8NEG7 585 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 LMX1AQ8TE12 382 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 FUBP1Q96AE4 644 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 TBC1D31Q96DN5 1066 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 DEPDC7Q96QD5 511 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 LRRC61Q9BV99 259 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 DUSP23Q9BVJ7 150 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 BOCQ9BWV1 1114 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 TTYH3Q9C0H2 523 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 NUP62CLQ9H1M0 184 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 POLR1BQ9H9Y6 1135 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 USP29Q9HBJ7 922 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 FANCLQ9NW38 375 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 LHX3Q9UBR4 397 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 SALL4Q9UJQ4 1053 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 MFHAS1Q9Y4C4 1052 aa11.31□□□□□ -0.6
HNRNPC-231ENST00000557336 AHCTF1Q8WYP5 2266 aa11.3□□□□□ -0.6
HNRNPC-231ENST00000557336 CPED1A4D0V7 1026 aa11.3□□□□□ -0.6
HNRNPC-231ENST00000557336 SIGLEC16A6NMB1 481 aa11.3□□□□□ -0.6
HNRNPC-231ENST00000557336 TPP1O14773 563 aa11.3□□□□□ -0.6
HNRNPC-231ENST00000557336 CCP110O43303 1012 aa11.3□□□□□ -0.6
HNRNPC-231ENST00000557336 ZIC2O95409 532 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-231ENST00000557336 KRT3P12035 628 aa11.3□□□□□ -0.6
HNRNPC-231ENST00000557336 ETFBP38117 255 aa11.3□□□□□ -0.6
HNRNPC-231ENST00000557336 PDX1P52945 283 aa11.3□□□□□ -0.6
HNRNPC-231ENST00000557336 RPL7AP62424 266 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms