RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 SAP25Q8TEE9 199 aa7.82□□□□□ -1.16
HNRNPC-226ENST00000556628 CASKIN2Q8WXE0 1202 aa7.82□□□□□ -1.16
HNRNPC-226ENST00000556628 RAB7BQ96AH8 199 aa7.82□□□□□ -1.16
HNRNPC-226ENST00000556628 ARHGEF26Q96DR7 871 aa7.82□□□□□ -1.16
HNRNPC-226ENST00000556628 VCPIP1Q96JH7 1222 aa7.82□□□□□ -1.16
HNRNPC-226ENST00000556628 CNPY3Q9BT09 278 aa7.82□□□□□ -1.16
HNRNPC-226ENST00000556628 CALN1Q9BXU9 219 aa7.82□□□□□ -1.16
HNRNPC-226ENST00000556628 RAB6CQ9H0N0 254 aa7.82□□□□□ -1.16
HNRNPC-226ENST00000556628 RBSNQ9H1K0 784 aa7.82□□□□□ -1.16
HNRNPC-226ENST00000556628 CCDC86Q9H6F5 360 aaKnown RBP7.82□□□□□ -1.16
HNRNPC-226ENST00000556628 NDFIP2Q9NV92 336 aa7.82□□□□□ -1.16
HNRNPC-226ENST00000556628 PARVAQ9NVD7 372 aa7.82□□□□□ -1.16
HNRNPC-226ENST00000556628 ZNF212Q9UDV6 495 aa7.82□□□□□ -1.16
HNRNPC-226ENST00000556628 LAMA1P25391 3075 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 CHD5Q8TDI0 1954 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 CDC14CA4D256 554 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 LRRC53A6NM62 1247 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 SRRM3A6NNA2 597 aaPredicted RBP7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 TMCO5BA8MYB1 307 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 KRIT1O00522 736 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 FGF10O15520 208 aaPredicted RBP7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 TEX33O43247 280 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 DAPK3O43293 454 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 TSPAN6O43657 245 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 KDELR3O43731 214 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 AP1G1O43747 822 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 RFPL3O75679 317 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 IGSF6O95976 241 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 GSRP00390 522 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 SERPINC1P01008 464 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 ALPPL2P10696 532 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 JUPP14923 745 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 PRLRP16471 622 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 XPAP23025 273 aaPredicted RBP7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 PSMA2P25787 234 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 HTR7P34969 479 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 TPI1P60174 286 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 RHOAP61586 193 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 DAB2P98082 770 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 SHBQ15464 509 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 ZNF284Q2VY69 593 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 PARP15Q460N3 678 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 ZNF805Q5CZA5 627 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 SFMBT2Q5VUG0 894 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 DHRS13Q6UX07 377 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 LEKR1Q6ZMV7 388 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 IRF2BP2Q7Z5L9 587 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 TMPRSS12Q86WS5 348 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 SPATS2Q86XZ4 545 aaKnown RBP7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 PYROXD2Q8N2H3 581 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 RTL3Q8N8U3 475 aaKnown RBP7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 OR13H1Q8NG92 308 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 OR6K2Q8NGY2 324 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 TRIM11Q96F44 468 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 GDAP1L1Q96MZ0 367 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 NCAPGQ9BPX3 1015 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 FUCA2Q9BTY2 467 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 OSBPL1AQ9BXW6 950 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 SLC17A9Q9BYT1 436 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 FZD3Q9NPG1 666 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 IPO11Q9UI26 975 aaKnown RBP7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 FZD10Q9ULW2 581 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 ZFR2Q9UPR6 939 aaKnown RBP7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 PCDHGA11Q9Y5H2 935 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 PCDHGA1Q9Y5H4 931 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 FADS3Q9Y5Q0 445 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 HS3ST3A1Q9Y663 406 aa7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 DNMT3AQ9Y6K1 912 aaPredicted RBP7.81□□□□□ -1.16
HNRNPC-226ENST00000556628 DOCK9Q9BZ29 2069 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 PLXNB3Q9ULL4 1909 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 TRPM6Q9BX84 2022 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 A0A1W2PQC6 194 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 NEMP2A6NFY4 417 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 C16orf96A6NNT2 1141 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 WASH4PA8MWX3 477 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 EIF3CLB5ME19 914 aaKnown RBP7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 RASA4BC9J798 803 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 GOLGA6L19H0YKK7 550 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 FPGTO14772 594 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 RASA4O43374 803 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 LILRA1O75019 489 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 SDC3O75056 442 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 ZNF821O75541 412 aaPredicted RBP7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 TMCC1O94876 653 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 DKK1O94907 266 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 PAK4O96013 591 aaPredicted RBP7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 CKMT2P17540 419 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 GKP32189 559 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 CLDN2P57739 230 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 HNRNPKP61978 463 aaKnown RBP eCLIP7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 RPL7AP62424 266 aaKnown RBP7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 KLHL30Q0D2K2 578 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 CCDC173Q0VFZ6 552 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 DNAJC3Q13217 504 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 ILKQ13418 452 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 GRM3Q14832 879 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 SMAD1Q15797 465 aaKnown RBP7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 MYLK3Q32MK0 819 aa7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 INO80DQ53TQ3 878 aaPredicted RBP7.8□□□□□ -1.16
HNRNPC-226ENST00000556628 CFAP58Q5T655 872 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms