RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 IRF4Q15306 451 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 ALG11Q2TAA5 492 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 MAP9Q49MG5 647 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 BRMS1LQ5PSV4 323 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 ZNF658Q5TYW1 1059 aaPredicted RBP14.12□□□□□ -0.15
ACTN1-219ENST00000556432 ENPP7Q6UWV6 458 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 TTC7BQ86TV6 843 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 DRC7Q8IY82 874 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 FAM26EQ8N5C1 309 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 EHBP1Q8NDI1 1231 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 LMO3Q8TAP4 145 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 WRAP53Q9BUR4 548 aaKnown RBP14.12□□□□□ -0.15
ACTN1-219ENST00000556432 INTS2Q9H0H0 1204 aaKnown RBP14.12□□□□□ -0.15
ACTN1-219ENST00000556432 GOLPH3LQ9H4A5 285 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 UBE2TQ9NPD8 197 aaPredicted RBP14.12□□□□□ -0.15
ACTN1-219ENST00000556432 MBNL1Q9NR56 388 aaKnown RBP14.12□□□□□ -0.15
ACTN1-219ENST00000556432 KLQ9UEF7 1012 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 ACTL7AQ9Y615 435 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 RNF215Q9Y6U7 377 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 UNC13CQ8NB66 2214 aa14.12□□□□□ -0.15
ACTN1-219ENST00000556432 SCN8AQ9UQD0 1980 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 BLACEA4D250 179 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 STMND1H3BQB6 276 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 PMM2O15305 246 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 P4HA2O15460 535 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 CASRP41180 1078 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 CCR10P46092 362 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 RNASE9P60153 205 aaKnown RBP14.11□□□□□ -0.15
ACTN1-219ENST00000556432 KRT85P78386 507 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 ARF5P84085 180 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 ZFP36L1Q07352 338 aaKnown RBP14.11□□□□□ -0.15
ACTN1-219ENST00000556432 POLD3Q15054 466 aaPredicted RBP14.11□□□□□ -0.15
ACTN1-219ENST00000556432 KLHL40Q2TBA0 621 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 DTX1Q86Y01 620 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 ZNF683Q8IZ20 524 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 IL22RA1Q8N6P7 574 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 KLHL32Q96NJ5 620 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 LRRC4CQ9HCJ2 640 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 ANLNQ9NQW6 1124 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 TMPRSS4Q9NRS4 437 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 ARHGEF38Q9NXL2 777 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 ANAPC2Q9UJX6 822 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 STAP1Q9ULZ2 295 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 CNTN6Q9UQ52 1028 aa14.11□□□□□ -0.15
ACTN1-219ENST00000556432 UTP20O75691 2785 aaKnown RBP14.11□□□□□ -0.15
ACTN1-219ENST00000556432 RELNP78509 3460 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 FAM237AA0A1B0GTK4 181 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 DRGXA6NNA5 263 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 TMEM110-MUSTN1A8MSY1 372 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 B4DGG1 531 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 TOR1BO14657 336 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 PSMA7O14818 248 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 ZMPSTE24O75844 475 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 TFE3P19532 575 aaPredicted RBP14.1□□□□□ -0.15
ACTN1-219ENST00000556432 XPAP23025 273 aaPredicted RBP14.1□□□□□ -0.15
ACTN1-219ENST00000556432 CXCR3P49682 368 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 SNX16P57768 344 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 SRP54P61011 504 aaKnown RBP14.1□□□□□ -0.15
ACTN1-219ENST00000556432 GNA12Q03113 381 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 DEUP1Q05D60 604 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 STIM1Q13586 685 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 OLFML1Q6UWY5 402 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 ZNF783Q6ZMS7 281 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 SPRED1Q7Z699 444 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 TAF8Q7Z7C8 310 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 C1orf131Q8NDD1 294 aaKnown RBP14.1□□□□□ -0.15
ACTN1-219ENST00000556432 CEP63Q96MT8 703 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 SLC12A9Q9BXP2 914 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 OSBPL1AQ9BXW6 950 aa14.1□□□□□ -0.15
ACTN1-219ENST00000556432 ZNF71Q9NQZ8 489 aaPredicted RBP14.1□□□□□ -0.15
ACTN1-219ENST00000556432 BSNQ9UPA5 3926 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 CREBBPQ92793 2442 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 AREL1O15033 823 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 ERBB2P04626 1255 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 GLB1P16278 677 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 SNRPD1P62314 119 aaKnown RBP14.09□□□□□ -0.15
ACTN1-219ENST00000556432 SLC6A3Q01959 620 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 NFATC4Q14934 902 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 LRRC14Q15048 493 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 AMZ1Q400G9 498 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 COBLL1Q53SF7 1204 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 CERCAMQ5T4B2 595 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 ATXN7L2Q5T6C5 722 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-219ENST00000556432 OTUD1Q5VV17 481 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-219ENST00000556432 LEKR1Q6ZMV7 388 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 SLC26A9Q7LBE3 791 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 HSCBQ8IWL3 235 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 TP53I13Q8NBR0 393 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-219ENST00000556432 FAM46DQ8NEK8 389 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 ATL2Q8NHH9 583 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 C9orf43Q8TAL5 461 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-219ENST00000556432 ISG20Q96AZ6 181 aaKnown RBP14.09□□□□□ -0.15
ACTN1-219ENST00000556432 ZYG11BQ9C0D3 744 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 SEMA6CQ9H3T2 930 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 RRN3Q9NYV6 651 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.09□□□□□ -0.15
ACTN1-219ENST00000556432 LRIT1Q9P2V4 623 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 TUBD1Q9UJT1 453 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 APPL1Q9UKG1 709 aa14.09□□□□□ -0.15
ACTN1-219ENST00000556432 HPCAL4Q9UM19 191 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms