RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 FAM92AA1XBS5 289 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 CCDC66A2RUB6 948 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 VWA3AA6NCI4 1184 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 A8MXQ7 604 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 PYCARD-AS1I3L0S3 204 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 CLDN5O00501 218 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 HGSO14964 777 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-239ENST00000556315 TLR5O60602 858 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 FSBPO95073 299 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 SEMA4FO95754 770 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 TBX18O95935 607 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 TNNC2P02585 160 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 PYGMP11217 842 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 MYCLP1P12525 358 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-239ENST00000556315 POU3F2P20265 443 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-239ENST00000556315 ABCB4P21439 1286 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 ACSL1P33121 698 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 DDIT3P35638 169 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 CHKAP35790 457 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 ACADVLP49748 655 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 NEK4P51957 841 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 MFAP3P55082 362 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 CLDN6P56747 220 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 HMGN5P82970 282 aaKnown RBP5.05□□□□□ -1.6
ATXN3-239ENST00000556315 IL9RQ01113 521 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 LY6DQ14210 128 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 ZNF234Q14588 700 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 EIF4HQ15056 248 aaKnown RBP5.05□□□□□ -1.6
ATXN3-239ENST00000556315 GPR19Q15760 415 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 ZXDCQ2QGD7 858 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-239ENST00000556315 RILPL1Q5EBL4 403 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 KCNT1Q5JUK3 1230 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 COLEC12Q5KU26 742 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 PRAMEF14Q5SWL7 426 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 KLHDC10Q6PID8 442 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 ERICH1Q86X53 443 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 GATAD2AQ86YP4 633 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 DHX40Q8IX18 779 aaKnown RBP5.05□□□□□ -1.6
ATXN3-239ENST00000556315 EID2Q8N6I1 236 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 DCBLD1Q8N8Z6 715 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 RAD54LQ92698 747 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 SAAL1Q96ER3 474 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 TSPAN17Q96FV3 270 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 HIC2Q96JB3 615 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 KCNK16Q96T55 309 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 SPATA25Q9BR10 227 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 STRA6Q9BX79 667 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 DPH1Q9BZG8 443 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 TRIM9Q9C026 710 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 MTMR12Q9C0I1 747 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 LHX5Q9H2C1 402 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 FBXO44Q9H4M3 255 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 MRPL44Q9H9J2 332 aaKnown RBP5.05□□□□□ -1.6
ATXN3-239ENST00000556315 SGK2Q9HBY8 427 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 PDE11AQ9HCR9 933 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 TLR8Q9NR97 1041 aaKnown RBP5.05□□□□□ -1.6
ATXN3-239ENST00000556315 BLOC1S4Q9NUP1 217 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 TMEM30AQ9NV96 361 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 PLK2Q9NYY3 685 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 SAMD15Q9P1V8 674 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 COQ6Q9Y2Z9 468 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 ZNF462Q96JM2 2506 aa5.05□□□□□ -1.6
ATXN3-239ENST00000556315 KIF26AQ9ULI4 1882 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-239ENST00000556315 NAV2Q8IVL1 2488 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 KNTC1P50748 2209 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 ATP8B3O60423 1300 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 BPTFQ12830 3046 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 A0A1W2PPC4 97 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 GOLGA8IPA6NC78 632 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 ZNF233A6NK53 670 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 GOLGA8JA6NMD2 632 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 CBX4O00257 560 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 KIAA0391O15091 583 aaKnown RBP5.04□□□□□ -1.6
ATXN3-239ENST00000556315 KLK10O43240 276 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 PRPF6O94906 941 aaKnown RBP5.04□□□□□ -1.6
ATXN3-239ENST00000556315 MT-CO3P00414 261 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 PENKP01210 267 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-239ENST00000556315 JMJD7P0C870 316 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 CKMT2P17540 419 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 GAP43P17677 238 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 PRKCHP24723 683 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 PI4KAP42356 2102 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 RXRGP48443 463 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 LSSP48449 732 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 MASP1P48740 699 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 ARRB1P49407 418 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-239ENST00000556315 SLC5A3P53794 718 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 ERVPABLB-1P60509 514 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 RPS14P62263 151 aaKnown RBP5.04□□□□□ -1.6
ATXN3-239ENST00000556315 GRIN1Q05586 938 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 ST3GAL1Q11201 340 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 ZNF460Q14592 562 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 SHBQ15464 509 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 GEN1Q17RS7 908 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 WDR72Q3MJ13 1102 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 L1TD1Q5T7N2 865 aaKnown RBP5.04□□□□□ -1.6
ATXN3-239ENST00000556315 LAYNQ6UX15 382 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 SERPINA13PQ6UXR4 307 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 PAQR9Q6ZVX9 377 aa5.04□□□□□ -1.6
ATXN3-239ENST00000556315 TRAPPC11Q7Z392 1133 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms