RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 GKP32189 559 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 PTGIRP43119 386 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 EPHB1P54762 984 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 SKOR1P84550 965 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 SATB1Q01826 763 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 NIPAL4Q0D2K0 466 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 GAS6Q14393 721 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 ZNF805Q5CZA5 627 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 ARMC12Q5T9G4 340 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 FAXCQ5TGI0 409 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 ANO7Q6IWH7 933 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 BRAT1Q6PJG6 821 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 KIAA1324Q6UXG2 1013 aaKnown RBP12.64□□□□□ -0.39
ABCD4-223ENST00000555904 TMEM92Q6UXU6 159 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 BMP8AQ7Z5Y6 402 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 PCGF5Q86SE9 256 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 PRUNE1Q86TP1 453 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 LINC00523Q86TU6 105 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 TMPRSS6Q8IU80 811 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 CAMK1DQ8IU85 385 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 CAMKK1Q8N5S9 505 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 GLIS1Q8NBF1 620 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 IPMKQ8NFU5 416 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 PIP4K2CQ8TBX8 421 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 SIPA1Q96FS4 1042 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 OMDQ99983 421 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 COL25A1Q9BXS0 654 aaPredicted RBP12.64□□□□□ -0.39
ABCD4-223ENST00000555904 SUV39H2Q9H5I1 410 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 PCDHGC4Q9Y5F7 938 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 RAI2Q9Y5P3 530 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 WASF2Q9Y6W5 498 aa12.64□□□□□ -0.39
ABCD4-223ENST00000555904 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.63□□□□□ -0.39
ABCD4-223ENST00000555904 EFCAB8A8MWE9 144 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 LAMTOR5O43504 91 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 PI15O43692 258 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 SLU7O95391 586 aaKnown RBP12.63□□□□□ -0.39
ABCD4-223ENST00000555904 MT-CYBP00156 380 aaPredicted RBP12.63□□□□□ -0.39
ABCD4-223ENST00000555904 CPP00450 1065 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 CTSLP07711 333 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 COL9A1P20849 921 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 ITGB7P26010 798 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 SLC8A1P32418 973 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 COPAP53621 1224 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 WNT3AP56704 352 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 RPL26P61254 145 aaKnown RBP12.63□□□□□ -0.39
ABCD4-223ENST00000555904 SARNPP82979 210 aaKnown RBP12.63□□□□□ -0.39
ABCD4-223ENST00000555904 CDK16Q00536 496 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 CALCOCO2Q13137 446 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 SEMA5AQ13591 1074 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 POM121L1PQ3SYA9 428 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 NAPEPLDQ6IQ20 393 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 FBXL19Q6PCT2 694 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 PRPF39Q86UA1 669 aaKnown RBP12.63□□□□□ -0.39
ABCD4-223ENST00000555904 BBOF1Q8ND07 529 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 HCAR2Q8TDS4 363 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 RMDN1Q96DB5 314 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 SNF8Q96H20 258 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 OXNAD1Q96HP4 312 aaPredicted RBP12.63□□□□□ -0.39
ABCD4-223ENST00000555904 FEM1CQ96JP0 617 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 MRGPRX1Q96LB2 322 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 KLHL32Q96NJ5 620 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 HHIPQ96QV1 700 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 FAM129BQ96TA1 746 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 ERP44Q9BS26 406 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 TRIM51Q9BSJ1 452 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 TDRD1Q9BXT4 1180 aaKnown RBP12.63□□□□□ -0.39
ABCD4-223ENST00000555904 MKRN2Q9H000 416 aaKnown RBP12.63□□□□□ -0.39
ABCD4-223ENST00000555904 ETNK1Q9HBU6 452 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 DKK3Q9UBP4 350 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 RPL26L1Q9UNX3 145 aaKnown RBP12.63□□□□□ -0.39
ABCD4-223ENST00000555904 NCKAP1Q9Y2A7 1128 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 NEU2Q9Y3R4 380 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 PCDHB9Q9Y5E1 797 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 VCANP13611 3396 aa12.63□□□□□ -0.39
ABCD4-223ENST00000555904 AP3B1O00203 1094 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 MID1O15344 667 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 RNASEH2AO75792 299 aaKnown RBP12.62□□□□□ -0.39
ABCD4-223ENST00000555904 PGLSO95336 258 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 SLC34A2O95436 690 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 AP2A1O95782 977 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 EPOP01588 193 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 MMP2P08253 660 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 GABRG2P18507 467 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 NDUFV2P19404 249 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 GRIA4P48058 902 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 SUOXP51687 545 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 NEK3P51956 506 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 TERF1P54274 439 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 RPS14P62263 151 aaKnown RBP12.62□□□□□ -0.39
ABCD4-223ENST00000555904 CDK18Q07002 472 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 TRAF2Q12933 501 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 FAM182AQ5T1J6 154 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 ERAP2Q6P179 960 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 PPP1R21Q6ZMI0 780 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 MAMSTRQ6ZN01 415 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 USP45Q70EL2 814 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 KDELC2Q7Z4H8 507 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 KBTBD6Q86V97 674 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 PPIL6Q8IXY8 311 aa12.62□□□□□ -0.39
ABCD4-223ENST00000555904 PDCD7Q8N8D1 485 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms