RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 PARP6Q2NL67 630 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 USP39Q53GS9 565 aaKnown RBP14.43□□□□□ -0.1
CHD8-208ENST00000555301 BRAT1Q6PJG6 821 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 WDR5BQ86VZ2 330 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 CAMK1DQ8IU85 385 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 HDDC3Q8N4P3 179 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.43□□□□□ -0.1
CHD8-208ENST00000555301 PAF1Q8N7H5 531 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 GANCQ8TET4 914 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 VOPP1Q96AW1 172 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 KLHL32Q96NJ5 620 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 HDAC8Q9BY41 377 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 TPSD1Q9BZJ3 242 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 VPS45Q9NRW7 570 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 FBXL12Q9NXK8 326 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 USP36Q9P275 1121 aaKnown RBP14.43□□□□□ -0.1
CHD8-208ENST00000555301 PAK5Q9P286 719 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 DKK3Q9UBP4 350 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 FZD4Q9ULV1 537 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 AAR2Q9Y312 384 aaKnown RBP14.43□□□□□ -0.1
CHD8-208ENST00000555301 PCDHGC4Q9Y5F7 938 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 RAI2Q9Y5P3 530 aa14.43□□□□□ -0.1
CHD8-208ENST00000555301 A0A1W2PP55 124 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 TSPAN11A1L157 253 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 GOLGA6CA6NDK9 693 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 GOLGA6BA6NDN3 693 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 C16orf96A6NNT2 1141 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 TRAFD1O14545 582 aaPredicted RBP14.42□□□□□ -0.1
CHD8-208ENST00000555301 SLC7A4O43246 635 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 HTRA2O43464 458 aaPredicted RBP14.42□□□□□ -0.1
CHD8-208ENST00000555301 RNASEH2AO75792 299 aaKnown RBP14.42□□□□□ -0.1
CHD8-208ENST00000555301 ANXA9O76027 345 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 GAS8O95995 478 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 MMP2P08253 660 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 GOLGA6DP0CG33 693 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 FNTBP49356 437 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 TPMTP51580 245 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 SUOXP51687 545 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 NEK3P51956 506 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 POLR2LP62875 67 aaKnown RBP14.42□□□□□ -0.1
CHD8-208ENST00000555301 SKOR1P84550 965 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 ARMC12Q5T9G4 340 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 TTC27Q6P3X3 843 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 FBXL19Q6PCT2 694 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 ERN2Q76MJ5 926 aaKnown RBP14.42□□□□□ -0.1
CHD8-208ENST00000555301 PRPF39Q86UA1 669 aaKnown RBP14.42□□□□□ -0.1
CHD8-208ENST00000555301 AADATQ8N5Z0 425 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 SPATA4Q8NEY3 305 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 SPOCK2Q92563 424 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 RAB7BQ96AH8 199 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 ARRDC3Q96B67 414 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 TADA1Q96BN2 335 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 LRRC45Q96CN5 670 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 ECHDC3Q96DC8 303 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 SPACA7Q96KW9 195 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 RBM15Q96T37 977 aaKnown RBP eCLIP14.42□□□□□ -0.12e-11■■■■■ 27.9
CHD8-208ENST00000555301 TDRD1Q9BXT4 1180 aaKnown RBP14.42□□□□□ -0.1
CHD8-208ENST00000555301 DDX47Q9H0S4 455 aaKnown RBP14.42□□□□□ -0.1
CHD8-208ENST00000555301 GOLGA6AQ9NYA3 693 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 FAM153AQ9UHL3 310 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 ARIH1Q9Y4X5 557 aaPredicted RBP14.42□□□□□ -0.1
CHD8-208ENST00000555301 MRFAP1Q9Y605 127 aa14.42□□□□□ -0.1
CHD8-208ENST00000555301 ECEL1O95672 775 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 SP9P0CG40 484 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 XPAP23025 273 aaPredicted RBP14.41□□□□□ -0.1
CHD8-208ENST00000555301 NFKBIAP25963 317 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 PSMB4P28070 264 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 DRD3P35462 400 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 TNNT3P45378 269 aaPredicted RBP14.41□□□□□ -0.1
CHD8-208ENST00000555301 METAP1P53582 386 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 GEMP55040 296 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 RPL26P61254 145 aaKnown RBP14.41□□□□□ -0.1
CHD8-208ENST00000555301 DMWDQ09019 674 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 CNTN1Q12860 1018 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 TRAF2Q12933 501 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 MPP3Q13368 585 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 POM121L1PQ3SYA9 428 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 FAM182AQ5T1J6 154 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 PARS2Q7L3T8 475 aaKnown RBP14.41□□□□□ -0.1
CHD8-208ENST00000555301 ZNF572Q7Z3I7 529 aaPredicted RBP14.41□□□□□ -0.1
CHD8-208ENST00000555301 TTC7BQ86TV6 843 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 NDUFAF2Q8N183 169 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 SPATA22Q8NHS9 363 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 PDCD6IPQ8WUM4 868 aaKnown RBP14.41□□□□□ -0.1
CHD8-208ENST00000555301 NELL1Q92832 810 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 SLCO2A1Q92959 643 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 FAM131CQ96AQ9 280 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 NSMCE3Q96MG7 304 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 BTBD1Q9H0C5 482 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 SGK2Q9HBY8 427 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 PCDH9Q9HC56 1237 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 ZSCAN32Q9NX65 697 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 PCYOX1Q9UHG3 505 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 CYP8B1Q9UNU6 501 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 RPL26L1Q9UNX3 145 aaKnown RBP14.41□□□□□ -0.1
CHD8-208ENST00000555301 PCDHB9Q9Y5E1 797 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 NUP205Q92621 2012 aa14.41□□□□□ -0.1
CHD8-208ENST00000555301 FZD6O60353 706 aa14.4□□□□□ -0.1
CHD8-208ENST00000555301 PGLSO95336 258 aa14.4□□□□□ -0.1
CHD8-208ENST00000555301 METTL18O95568 372 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms