RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 XKR4Q5GH76 650 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SULT1C3Q6IMI6 304 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ZNF730Q6ZMV8 503 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ADHFE1Q8IWW8 467 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 C8orf59Q8N0T1 100 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 FEM1CQ96JP0 617 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 AIFM2Q9BRQ8 373 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 TBC1D10AQ9BXI6 508 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ATP13A3Q9H7F0 1226 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 GMEB1Q9Y692 573 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 OAS3Q9Y6K5 1087 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 MAP2P11137 1827 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 CCDC162PA2VCL2 907 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 MAGEC1O60732 1142 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 AMPD1P23109 780 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 FAM151BQ6UXP7 276 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ART5Q96L15 291 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 MCCC1Q96RQ3 725 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 RNF19AQ9NV58 838 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 CRNNQ9UBG3 495 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 L1RE1Q9UN81 338 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 TRBV23OR9-2A0A075B6M9 112 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 A0A087X0B3 334 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 GNB5O14775 395 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SLC26A4O43511 780 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 PGAM2P15259 253 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 RPA1P27694 616 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 MAGEA2P43356 314 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SLC6A9P48067 706 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 RAB27AP51159 221 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SNRPD1P62314 119 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 OGFRL1Q5TC84 451 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 PSRC1Q6PGN9 363 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 BHLHB9Q6PI77 547 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 C11orf65Q8NCR3 313 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SPATA5L1Q9BVQ7 753 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 CCDC167Q9P0B6 97 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 NDRG2Q9UN36 371 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 BIVM-ERCC5R4GMW8 1640 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 NRKQ7Z2Y5 1582 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 IGSF1Q8N6C5 1336 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 NEDD8-MDP1E9PL57 170 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 BUD23O43709 281 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ZBTB11O95625 1053 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 DGKAP23743 735 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 PTPN11Q06124 597 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ALX1Q15699 326 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 NRF1Q16656 503 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 MINDY4Q4G0A6 757 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 PPP1R15BQ5SWA1 713 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 METTL7BQ6UX53 244 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ARHGEF19Q8IW93 802 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 C12orf56Q8IXR9 622 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 MTMR8Q96EF0 704 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SLC47A1Q96FL8 570 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 C12orf4Q9NQ89 552 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 XPNPEP3Q9NQH7 507 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 C3orf18Q9UK00 162 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 MSL3P1P0C860 447 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 CAPGP40121 348 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SCNN1GP51170 649 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SQLEQ14534 574 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ITIH4Q14624 930 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 NR1I3Q14994 352 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 TIMM50Q3ZCQ8 353 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 CWF19L1Q69YN2 538 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 PTCD2Q8WV60 388 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ACAT2Q9BWD1 397 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SAMD4AQ9UPU9 718 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 MAPRE3Q9UPY8 281 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 BRWD1Q9NSI6 2320 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SHANK2Q9UPX8 1470 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 KIAA0100Q14667 2235 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ADH1CP00326 375 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SAGP10523 405 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 PDHBP11177 359 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SCTRP47872 440 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 NPTX2P47972 431 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SMIM11AP58511 58 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 FOXM1Q08050 763 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 INTS11Q5TA45 600 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 MAP1SQ66K74 1059 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 THOC7Q6I9Y2 204 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 NAXEQ8NCW5 288 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 GJD4Q96KN9 370 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ITGA11Q9UKX5 1188 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 CCDC163A0A0D9SF12 145 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 TNFAIP8O95379 198 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 SNRPFP62306 86 aaKnown RBP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CENPSQ8N2Z9 138 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 UBR7Q8N806 425 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 FRMD8P1Q9BZ68 369 aaPredicted RBP6.92□□□□□ -1.3
SYNE2-216ENST00000555002 MARCH7Q9H992 704 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 RDH8Q9NYR8 311 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 NKIRAS2Q9NYR9 191 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 BTRCQ9Y297 605 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 MROH7Q68CQ1 1323 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 CACNA1CQ13936 2221 aa6.92□□□□□ -1.3
SYNE2-216ENST00000555002 PGRMC2O15173 223 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms