RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 HOXC11O43248 304 aaPredicted RBP17.61■□□□□ 0.41
SHOX-204ENST00000554971 DCXO43602 365 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 APRTP07741 180 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 TYRP14679 529 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 CD72P21854 359 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 CTHP32929 405 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 CDK18Q07002 472 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 ANO4Q32M45 955 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 PPP6R3Q5H9R7 873 aaPredicted RBP17.61■□□□□ 0.41
SHOX-204ENST00000554971 MANEALQ5VSG8 457 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 CFAP52Q8N1V2 620 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 CPA6Q8N4T0 437 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 GSDMBQ8TAX9 411 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 CSGALNACT1Q8TDX6 532 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 C1orf74Q96LT6 269 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 BBS2Q9BXC9 721 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 IQCGQ9H095 443 aaKnown RBP17.61■□□□□ 0.41
SHOX-204ENST00000554971 DHX35Q9H5Z1 703 aaKnown RBP17.61■□□□□ 0.41
SHOX-204ENST00000554971 FBRSL1Q9HCM7 1045 aaKnown RBP17.61■□□□□ 0.41
SHOX-204ENST00000554971 EIF2B3Q9NR50 452 aaKnown RBP17.61■□□□□ 0.41
SHOX-204ENST00000554971 WNT16Q9UBV4 365 aa17.61■□□□□ 0.41
SHOX-204ENST00000554971 SPECC1L-ADORA2AF8WAN1 911 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 DNAJC6O75061 913 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 STK10O94804 968 aaKnown RBP17.6■□□□□ 0.41
SHOX-204ENST00000554971 ADH1CP00326 375 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 CCNFP41002 786 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 OPRD1P41143 372 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 AIF1P55008 147 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 SEMA3BQ13214 749 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 HEATR6Q6AI08 1181 aaKnown RBP17.6■□□□□ 0.41
SHOX-204ENST00000554971 TIFABQ6ZNK6 161 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 CIR1Q86X95 450 aaPredicted RBP17.6■□□□□ 0.41
SHOX-204ENST00000554971 LGI2Q8N0V4 545 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 TAB3Q8N5C8 712 aaPredicted RBP17.6■□□□□ 0.41
SHOX-204ENST00000554971 NAT16Q8N8M0 369 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 WFDC5Q8TCV5 224 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 SPOCK2Q92563 424 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 EDAQ92838 391 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 SERAC1Q96JX3 654 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 CSPG4P5Q96PW8 444 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 TSSK1BQ9BXA7 367 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 OR12D3Q9UGF7 316 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 LNPEPQ9UIQ6 1025 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 COPEO14579 308 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 ATP5BP06576 529 aaKnown RBP17.6■□□□□ 0.41
SHOX-204ENST00000554971 SLC6A11P48066 632 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 NAB1Q13506 487 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 ARL13BQ3SXY8 428 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 C5orf22Q49AR2 442 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 NLRP9Q7RTR0 991 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 TFB1MQ8WVM0 346 aaKnown RBP17.6■□□□□ 0.41
SHOX-204ENST00000554971 TMA16Q96EY4 203 aaKnown RBP17.6■□□□□ 0.41
SHOX-204ENST00000554971 SIGLEC10Q96LC7 697 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 NAT9Q9BTE0 207 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 OSBPL2Q9H1P3 480 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 RAD54BQ9Y620 910 aa17.6■□□□□ 0.41
SHOX-204ENST00000554971 CACNA1IQ9P0X4 2223 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 IGLV3-10A0A075B6K4 115 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 FAM159BA6NKW6 160 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 CACNG3O60359 315 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 KRT16P08779 473 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 PRKD1Q15139 912 aaPredicted RBP17.59■□□□□ 0.41
SHOX-204ENST00000554971 MLF2Q15773 248 aaPredicted RBP17.59■□□□□ 0.41
SHOX-204ENST00000554971 ASTLQ6HA08 431 aaPredicted RBP17.59■□□□□ 0.41
SHOX-204ENST00000554971 ZNF449Q6P9G9 518 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 SFTPA1Q8IWL2 248 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 SIX5Q8N196 739 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 PHTF2Q8N3S3 785 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 CFAP61Q8NHU2 1237 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 DDI1Q8WTU0 396 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 CFAP36Q96G28 342 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 OLFM3Q96PB7 478 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 SLC17A7Q9P2U7 560 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 A0A0A0MRY4 1105 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 E9PAM4 449 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 F5H5T6 163 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 H3BRJ5 948 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 PPP1R12AO14974 1030 aaPredicted RBP17.59■□□□□ 0.41
SHOX-204ENST00000554971 OPHN1O60890 802 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 CNTN5O94779 1100 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 LRIG2O94898 1065 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 PYGBP11216 843 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 NRLP54845 237 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 NRG1Q02297 640 aaPredicted RBP17.59■□□□□ 0.41
SHOX-204ENST00000554971 MTA1Q13330 715 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 MPPE1Q53F39 396 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 ALFQ53S48 1182 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 ATG16L1Q676U5 607 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 TPRG1Q6ZUI0 275 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 PPM1NQ8N819 430 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 CCDC110Q8TBZ0 833 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 HTR3CQ8WXA8 447 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 SPATA13Q96N96 652 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 KCTD15Q96SI1 283 aaPredicted RBP17.59■□□□□ 0.41
SHOX-204ENST00000554971 MPP6Q9NZW5 540 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 ZNF212Q9UDV6 495 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 ZFP69BQ9UJL9 534 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 FBXO10Q9UK96 956 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 PLLPQ9Y342 182 aa17.59■□□□□ 0.41
SHOX-204ENST00000554971 ANTXRLA6NF34 631 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms