RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TEX13CA0A0J9YWL9 993 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 CBY3A6NI87 242 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 KDM4EB2RXH2 506 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-211ENST00000554437 CCER2I3L3R5 266 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 INSIG1O15503 277 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 ITM2AO43736 263 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 ZNF500O60304 480 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-211ENST00000554437 ALPLP05186 524 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 GALTP07902 379 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 TFPIP10646 304 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 COX7A2P14406 83 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 ZNF8P17098 575 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-211ENST00000554437 PTPN2P17706 415 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 POU1F1P28069 291 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 HOXD3P31249 432 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-211ENST00000554437 FMO4P31512 558 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 DCTDP32321 178 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 FHL1Q13642 323 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 VEPH1Q14D04 833 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 TAF11Q15544 211 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 ZNF280DQ6N043 979 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 PATL1Q86TB9 770 aaKnown RBP5.29□□□□□ -1.56
SCFD1-211ENST00000554437 TBC1D26Q86UD7 250 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 GLCCI1Q86VQ1 547 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 KIAA2013Q8IYS2 634 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 C11orf65Q8NCR3 313 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 GPT2Q8TD30 523 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 SEC62Q99442 399 aaKnown RBP5.29□□□□□ -1.56
SCFD1-211ENST00000554437 LBHD1Q9BQE6 289 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-211ENST00000554437 NUF2Q9BZD4 464 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 DCLK3Q9C098 648 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 IL36RNQ9UBH0 155 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 CTNNAL1Q9UBT7 734 aa5.29□□□□□ -1.56
SCFD1-211ENST00000554437 TACC1O75410 805 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 CBSLP0DN79 551 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 PCNAP12004 261 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 NAGAP17050 411 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 ABCD3P28288 659 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 HOXA11P31270 313 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-211ENST00000554437 CBSP35520 551 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 MLH1P40692 756 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 CDKN2AP42771 156 aaKnown RBP5.28□□□□□ -1.56
SCFD1-211ENST00000554437 FAM27E3Q08E93 113 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 HNF4GQ14541 408 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 INTS11Q5TA45 600 aaKnown RBP5.28□□□□□ -1.56
SCFD1-211ENST00000554437 LRCH2Q5VUJ6 765 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 PRR26Q8N8Z3 221 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 ZC3HAV1LQ96H79 300 aaKnown RBP5.28□□□□□ -1.56
SCFD1-211ENST00000554437 WACQ9BTA9 647 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 MSTO1Q9BUK6 570 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 HEMGNQ9BXL5 484 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 ANKRD10Q9NXR5 420 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 ZNF69Q9UC07 566 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 NDRG3Q9UGV2 375 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 MYO6Q9UM54 1294 aa5.28□□□□□ -1.56
SCFD1-211ENST00000554437 KLRF2D3W0D1 207 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 ASAP2O43150 1006 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 SRD5A1P18405 259 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 EDN2P20800 178 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 RYKP34925 604 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 HTR6P50406 440 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 NR1H2P55055 460 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 FOXG1P55316 489 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-211ENST00000554437 HDAC4P56524 1084 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 ABATP80404 500 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 G3BP1Q13283 466 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCFD1-211ENST00000554437 MYBPC2Q14324 1141 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 SLC9B1Q4ZJI4 515 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 DCAF6Q58WW2 860 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 PRAMEF19Q5SWL8 479 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 JAKMIP3Q5VZ66 844 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 MB21D2Q8IYB1 491 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-211ENST00000554437 FBXL14Q8N1E6 418 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 PDILTQ8N807 584 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 TSPYL6Q8N831 410 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 NAXEQ8NCW5 288 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 ZUFSPQ96AP4 578 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 KLHL15Q96M94 604 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 NTPCRQ9BSD7 190 aaKnown RBP5.27□□□□□ -1.57
SCFD1-211ENST00000554437 JMJD4Q9H9V9 463 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 C20orf141Q9NUB4 165 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 HSPB7Q9UBY9 170 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 NRBP1Q9UHY1 535 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 PCDHA7Q9UN72 937 aa5.27□□□□□ -1.57
SCFD1-211ENST00000554437 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCFD1-211ENST00000554437 HSPB2A8KAH6 182 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 F9P00740 461 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 HOXC6P09630 235 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 ATP1A3P13637 1013 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 MYF6P23409 242 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 CXCR3P49682 368 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 NUDT6P53370 316 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 CLDN2P57739 230 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 KRTAP10-11P60412 298 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 ARHGEF6Q15052 776 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 HSPB2Q16082 182 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 ACAD10Q6JQN1 1059 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 TRILQ7L0X0 811 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 ARMC8Q8IUR7 673 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 SAMD14Q8IZD0 417 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms