RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 MEGF6O75095 1541 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SEC24AO95486 1093 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 KRT1P04264 644 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 HTR1AP08908 422 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 TCF4P15884 667 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 AXLP30530 894 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SERPINB10P48595 397 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SEPHS1P49903 392 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 ETV1P50549 477 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 ADCY7P51828 1080 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 GP2P55259 537 aaKnown RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 PSME3P61289 254 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 ADPRMQ3LIE5 342 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SBK1Q52WX2 424 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 KCNT1Q5JUK3 1230 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 C1orf220Q5T0J3 134 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 FRMPD2Q68DX3 1309 aaPredicted RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 METTL3Q86U44 580 aaKnown RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 LOXHD1Q8IVV2 1947 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SAMD14Q8IZD0 417 aaPredicted RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 TAB3Q8N5C8 712 aaPredicted RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 ZNF781Q8N8C0 355 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 OR13J1Q8NGT2 312 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 ADAM32Q8TC27 787 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 ANKRD49Q8WVL7 239 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SNAPC3Q92966 411 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 PIGSQ96S52 555 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 NPAS2Q99743 824 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 KCTD14Q9BQ13 255 aaPredicted RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 RNPEPQ9H4A4 650 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SPC25Q9HBM1 224 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 DCP1AQ9NPI6 582 aaPredicted RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 AGPAT4Q9NRZ5 378 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 ADA2Q9NZK5 511 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 WARS2Q9UGM6 360 aaKnown RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 MTMR7Q9Y216 660 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 CDY2AQ9Y6F7 541 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 CDY1Q9Y6F8 540 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 LOC102724428A0A0B4J2F2 783 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 ZNF780AO75290 641 aaPredicted RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 GLRA3O75311 464 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 CDK14O94921 469 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SEMA3DO95025 777 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 JUNP05412 331 aaKnown RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 YES1P07947 543 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 GFAPP14136 432 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 IL12AP29459 219 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 UQCRC1P31930 480 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SHMT2P34897 504 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 EVI2BP34910 448 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 GRK3P35626 688 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 GARSP41250 739 aaKnown RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 TNNI2P48788 182 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SIK1P57059 783 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 OR2B6P58173 313 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 ACTR2P61160 394 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 CCNA1P78396 465 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 C1QBPQ07021 282 aaKnown RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 DPY19L1Q2PZI1 675 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 TYSND1Q2T9J0 566 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 TREML2Q5T2D2 321 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 CYP2R1Q6VVX0 501 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 ZNF600Q6ZNG1 722 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 CATSPER4Q7RTX7 472 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 PRSS48Q7RTY5 328 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 ADCK1Q86TW2 530 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 LDHDQ86WU2 507 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 METTL4Q8N3J2 472 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SVOPQ8N4V2 548 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 OR4M1Q8NGD0 313 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 BCL7CQ8WUZ0 217 aaPredicted RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 CANT1Q8WVQ1 401 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SLC7A3Q8WY07 619 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 ASIC4Q96FT7 647 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 TMEM47Q9BQJ4 181 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SLIRPQ9GZT3 109 aaKnown RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.63□□□□□ -0.87
SIX4-202ENST00000554079 ADNPQ9H2P0 1102 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SOX17Q9H6I2 414 aaPredicted RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 ERVMER34-1Q9H9K5 563 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 JMJD4Q9H9V9 463 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 POPDC2Q9HBU9 364 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 MRPL40Q9NQ50 206 aaKnown RBP9.63□□□□□ -0.87
SIX4-202ENST00000554079 RAB20Q9NX57 234 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 CD300AQ9UGN4 299 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 SARDHQ9UL12 918 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 USTQ9Y2C2 406 aa9.63□□□□□ -0.87
SIX4-202ENST00000554079 HEATR9A2RTY3 570 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 TYW5A2RUC4 315 aaKnown RBP9.62□□□□□ -0.87
SIX4-202ENST00000554079 USP17L3A6NCW0 530 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 USP17L4A6NCW7 530 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 PRORSD1PA6NEY8 169 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 A8MV72 311 aaPredicted RBP9.62□□□□□ -0.87
SIX4-202ENST00000554079 NOS1APO75052 506 aaPredicted RBP9.62□□□□□ -0.87
SIX4-202ENST00000554079 ATG13O75143 517 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 TRIM16O95361 564 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 VNN1O95497 513 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 PAHP00439 452 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 GAP43P17677 238 aa9.62□□□□□ -0.87
SIX4-202ENST00000554079 ATF6P18850 670 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms