RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 DEFB119Q8N690 84 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 CADM4Q8NFZ8 388 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 OR2T34Q8NGX1 318 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 HCAR2Q8TDS4 363 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 PDCD6IPQ8WUM4 868 aaKnown RBP13.99□□□□□ -0.17
TUBB3-202ENST00000553656 RAB7BQ96AH8 199 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 ZNF419Q96HQ0 510 aaPredicted RBP13.99□□□□□ -0.17
TUBB3-202ENST00000553656 NAP1L3Q99457 506 aaPredicted RBP13.99□□□□□ -0.17
TUBB3-202ENST00000553656 NAPGQ99747 312 aaPredicted RBP13.99□□□□□ -0.17
TUBB3-202ENST00000553656 KDM4CQ9H3R0 1056 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 NOD2Q9HC29 1040 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 DKK3Q9UBP4 350 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 GMEB2Q9UKD1 530 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 TRHDEQ9UKU6 1024 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 ATP8A1Q9Y2Q0 1164 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 EML5Q05BV3 1969 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 PLXND1Q9Y4D7 1925 aa13.99□□□□□ -0.17
TUBB3-202ENST00000553656 TBC1D3DA0A087WVF3 549 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TBC1D3IA0A087WXS9 549 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TBC1D3EA0A087X179 549 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TBC1D3KA0A087X1G2 549 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TCRBV7S2A1N4TA0A589 114 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TTC24A2A3L6 582 aaPredicted RBP13.98□□□□□ -0.17
TUBB3-202ENST00000553656 BCLAF3A2AJT9 711 aaKnown RBP13.98□□□□□ -0.17
TUBB3-202ENST00000553656 CTAGE9A4FU28 777 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 CFAP69A5D8W1 941 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TBC1D3FA6NER0 549 aaPredicted RBP13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TBC1D3LB9A6J9 549 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 KCNN4O15554 427 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 PLRG1O43660 514 aaKnown RBP13.98□□□□□ -0.17
TUBB3-202ENST00000553656 GJB3O75712 270 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 LMNAP02545 664 aaKnown RBP13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TBC1D3HP0C7X1 549 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TCP1P17987 556 aaKnown RBP13.98□□□□□ -0.17
TUBB3-202ENST00000553656 RBL1P28749 1068 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TNNT3P45378 269 aaPredicted RBP13.98□□□□□ -0.17
TUBB3-202ENST00000553656 SUOXP51687 545 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 POLR2LP62875 67 aaKnown RBP13.98□□□□□ -0.17
TUBB3-202ENST00000553656 ARMC12Q5T9G4 340 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TBC1D3GQ6DHY5 549 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 ALG1LQ6GMV1 187 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 ITPRIPL1Q6GPH6 555 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 LAIR1Q6GTX8 287 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TBC1D3CQ6IPX1 549 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 ERAP2Q6P179 960 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 PID1Q7Z2X4 250 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TBC1D3Q8IZP1 549 aaPredicted RBP13.98□□□□□ -0.17
TUBB3-202ENST00000553656 NDUFAF2Q8N183 169 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 C17orf53Q8N3J3 647 aaPredicted RBP13.98□□□□□ -0.17
TUBB3-202ENST00000553656 SNX19Q92543 992 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 LOXL4Q96JB6 756 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TEKT5Q96M29 485 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 HSPA12BQ96MM6 686 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 OSBPL9Q96SU4 736 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 DUSP15Q9H1R2 295 aaPredicted RBP13.98□□□□□ -0.17
TUBB3-202ENST00000553656 PREBQ9HCU5 417 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TPX2Q9ULW0 747 aaKnown RBP13.98□□□□□ -0.17
TUBB3-202ENST00000553656 SNX12Q9UMY4 172 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 R3HDM2Q9Y2K5 976 aaKnown RBP13.98□□□□□ -0.17
TUBB3-202ENST00000553656 ZKSCAN5Q9Y2L8 839 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 CACNA1HO95180 2353 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 FANCMQ8IYD8 2048 aa13.98□□□□□ -0.17
TUBB3-202ENST00000553656 TSPAN11A1L157 253 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 UPK3BL1B0FP48 263 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 UPK3BL2E5RIL1 263 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 FSBPO95073 299 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 PCDH8O95206 1070 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 CD86P42081 329 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 DPP6P42658 865 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 ELP6Q0PNE2 266 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 WASHC5Q12768 1159 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 WDR45BQ5MNZ6 344 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 KIAA0895LQ68EN5 471 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 CYP2U1Q7Z449 544 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 RGL4Q8IZJ4 473 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 CNTD1Q8N815 330 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 SLC35B2Q8TB61 432 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 ATG4AQ8WYN0 398 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 FAM131CQ96AQ9 280 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 WDR24Q96S15 920 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 SLC25A51Q9H1U9 297 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 C6orf106Q9H6K1 298 aaPredicted RBP13.97□□□□□ -0.17
TUBB3-202ENST00000553656 C10orf88Q9H8K7 445 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 GLOD4Q9HC38 313 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 HOMER3Q9NSC5 361 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 NCDNQ9UBB6 729 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 RSPH14Q9UHP6 348 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 DNPEPQ9ULA0 475 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 PCDHGC4Q9Y5F7 938 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 RAI2Q9Y5P3 530 aa13.97□□□□□ -0.17
TUBB3-202ENST00000553656 GOLGA6L10A0A0M3HER8 536 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 METTL12A8MUP2 240 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 PROB1E7EW31 1015 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 PGRMC1O00264 195 aaKnown RBP13.96□□□□□ -0.17
TUBB3-202ENST00000553656 CES2O00748 559 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 AP1G1O43747 822 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 LIASO43766 372 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 CPP00450 1065 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 EPHB1P54762 984 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 CREB5Q02930 508 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms