RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 CHSY1Q86X52 802 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CPNE8Q86YQ8 564 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 TMC8Q8IU68 726 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 SPPL2CQ8IUH8 684 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 DENND1CQ8IV53 801 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CDKL3Q8IVW4 592 aaPredicted RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 LGI2Q8N0V4 545 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 PYROXD2Q8N2H3 581 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 BBS5Q8N3I7 341 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CPXM2Q8N436 756 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 PLD5Q8N7P1 536 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 PRELID2Q8N945 189 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CCDC89Q8N998 374 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 EIF1ADQ8N9N8 165 aaKnown RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CCNYQ8ND76 341 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 PCDH19Q8TAB3 1148 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 ACTL9Q8TC94 416 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 TFB1MQ8WVM0 346 aaKnown RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 C1orf54Q8WWF1 131 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 SLCO2A1Q92959 643 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 NKD2Q969F2 451 aaPredicted RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CCDC114Q96M63 670 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 RPRD1AQ96P16 312 aaPredicted RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CYP2S1Q96SQ9 504 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 VAT1Q99536 393 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 LRRC1Q9BTT6 524 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 SLC46A2Q9BY10 475 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 RAB6CQ9H0N0 254 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 ADAM7Q9H2U9 754 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 GKN1Q9NS71 199 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 RBM12Q9NTZ6 932 aaKnown RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 TMEM248Q9NWD8 314 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 THG1LQ9NWX6 298 aaKnown RBP5.13□□□□□ -1.59
VTI1B-202ENST00000553619 MTMR10Q9NXD2 777 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 OBP2AQ9NY56 170 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 GDE1Q9NZC3 331 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CALCOCO1Q9P1Z2 691 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 STOML2Q9UJZ1 356 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 HPCAL4Q9UM19 191 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 ARHGAP26Q9UNA1 814 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 HEY1Q9Y5J3 304 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 CPQQ9Y646 472 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 HS3ST4Q9Y661 456 aa5.13□□□□□ -1.59
VTI1B-202ENST00000553619 MYO7AQ13402 2215 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 IGLV3-10A0A075B6K4 115 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 GOLGA6CA6NDK9 693 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 GOLGA6BA6NDN3 693 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 TCAF2A6NFQ2 919 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 H0Y626 953 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 SGK1O00141 431 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 RFXAPO00287 272 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 LEFTY2O00292 366 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 DCLK1O15075 740 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 CTIFO43310 598 aaKnown RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 LIASO43766 372 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 KRT14P02533 472 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 CD48P09326 243 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 RHOXF2BP0C7M4 288 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 GOLGA6DP0CG33 693 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 MED14OSP0DP75 135 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 IRF1P10914 325 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 SRFP11831 508 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 GLDCP23378 1020 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 OR1E1P30953 314 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 PGFP49763 221 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 KCNQ1P51787 676 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 VCPP55072 806 aaKnown RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 SARNPP82979 210 aaKnown RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 CHRNEQ04844 493 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 HYAL1Q12794 435 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 CALCOCO2Q13137 446 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 SNX1Q13596 522 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 CUL1Q13616 776 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 SLC12A1Q13621 1099 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 DPYSQ14117 519 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 BRD3Q15059 726 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 NOMO1Q15155 1222 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 E2F5Q15329 346 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 LLGL1Q15334 1064 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 SIX1Q15475 284 aaPredicted RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 TEAD2Q15562 447 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 ERCC6LQ2NKX8 1250 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 ANO4Q32M45 955 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 P3H1Q32P28 736 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 PREPLQ4J6C6 727 aaPredicted RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 MPP7Q5T2T1 576 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 OTUD1Q5VV17 481 aaPredicted RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 RAP1GAP2Q684P5 730 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 HEATR6Q6AI08 1181 aaKnown RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 FBXL22Q6P050 247 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 TMC5Q6UXY8 1006 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 ZNF783Q6ZMS7 281 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 EP400NLQ6ZTU2 488 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 CHST9Q7L1S5 443 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 SETD3Q86TU7 594 aaPredicted RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 ARID3BQ8IVW6 561 aaPredicted RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 UMODL1-AS1Q8N2C9 162 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 PQLC3Q8N755 202 aa5.12□□□□□ -1.59
VTI1B-202ENST00000553619 RTL3Q8N8U3 475 aaKnown RBP5.12□□□□□ -1.59
VTI1B-202ENST00000553619 HJURPQ8NCD3 748 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms