RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 C1QTNF2Q9BXJ5 285 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 GPR27Q9NS67 375 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 LUC7L2Q9Y383 392 aaKnown RBP18.44■□□□□ 0.54
SHMT2-206ENST00000553529 SCINQ9Y6U3 715 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 NEMP1O14524 444 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 SIGLEC6O43699 453 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 LDOC1O95751 146 aaPredicted RBP18.43■□□□□ 0.54
SHMT2-206ENST00000553529 CYP1A2P05177 515 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 RXRGP48443 463 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 ACADVLP49748 655 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 NDST2P52849 883 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 GEMIN4P57678 1058 aaKnown RBP18.43■□□□□ 0.54
SHMT2-206ENST00000553529 TAS2R40P59535 323 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 RPS21P63220 83 aaKnown RBP18.43■□□□□ 0.54
SHMT2-206ENST00000553529 SLC10A7Q0GE19 358 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 KIAA1161Q6NSJ0 714 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 ALKBH5Q6P6C2 394 aaKnown RBP18.43■□□□□ 0.54
SHMT2-206ENST00000553529 CCNI2Q6ZMN8 369 aaPredicted RBP18.43■□□□□ 0.54
SHMT2-206ENST00000553529 POLNQ7Z5Q5 900 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 RBFAQ8N0V3 343 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 PGBD5Q8N414 524 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 SYN2Q92777 582 aaPredicted RBP18.43■□□□□ 0.54
SHMT2-206ENST00000553529 SKA1Q96BD8 255 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 CSPG4P5Q96PW8 444 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 CDC6Q99741 560 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 RETREG1Q9H6L5 497 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 ERVMER34-1Q9H9K5 563 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 PCDH18Q9HCL0 1135 aa18.43■□□□□ 0.54
SHMT2-206ENST00000553529 CEP295Q9C0D2 2601 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 A0A0U1RQS6 177 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 FAM221BA6H8Z2 402 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 ZSCAN5CA6NGD5 496 aaPredicted RBP18.42■□□□□ 0.54
SHMT2-206ENST00000553529 A8MX80 341 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 AP1G1O43747 822 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 PEX11BO96011 259 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 MYBL1P10243 752 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 DGKAP23743 735 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 IL4RP24394 825 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 ARRB1P49407 418 aaPredicted RBP18.42■□□□□ 0.54
SHMT2-206ENST00000553529 EIF2B5Q13144 721 aaKnown RBP18.42■□□□□ 0.54
SHMT2-206ENST00000553529 DPYSL2Q16555 572 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 INO80DQ53TQ3 878 aaPredicted RBP18.42■□□□□ 0.54
SHMT2-206ENST00000553529 IQCHQ86VS3 1027 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 FEM1CQ96JP0 617 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 SMIM14Q96QK8 99 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 CHP1Q99653 195 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 NCAPGQ9BPX3 1015 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 SP110Q9HB58 689 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 PCDH12Q9NPG4 1184 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 DNAJC28Q9NX36 388 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 EPG5Q9HCE0 2579 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 SHROOM3Q8TF72 1996 aa18.42■□□□□ 0.54
SHMT2-206ENST00000553529 ARID1BQ8NFD5 2236 aaPredicted RBP18.42■□□□□ 0.54
SHMT2-206ENST00000553529 IGF2RP11717 2491 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 ARHGAP42A6NI28 874 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 A6NNZ2 444 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 PALMO75781 387 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 PIAS2O75928 621 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 TRIM16O95361 564 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 CELA2BP08218 269 aaPredicted RBP18.41■□□□□ 0.54
SHMT2-206ENST00000553529 PCK1P35558 622 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 SSR1P43307 286 aaKnown RBP18.41■□□□□ 0.54
SHMT2-206ENST00000553529 ADKP55263 362 aaKnown RBP18.41■□□□□ 0.54
SHMT2-206ENST00000553529 MAXP61244 160 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 PDE1CQ14123 709 aaPredicted RBP18.41■□□□□ 0.54
SHMT2-206ENST00000553529 IRF4Q15306 451 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 ASTE1Q2TB18 679 aaPredicted RBP18.41■□□□□ 0.54
SHMT2-206ENST00000553529 PPP1R2P3Q6NXS1 205 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 KYAT3Q6YP21 454 aaKnown RBP18.41■□□□□ 0.54
SHMT2-206ENST00000553529 TMPRSS7Q7RTY8 843 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 KDF1Q8NAX2 398 aaPredicted RBP18.41■□□□□ 0.54
SHMT2-206ENST00000553529 TP53I13Q8NBR0 393 aaPredicted RBP18.41■□□□□ 0.54
SHMT2-206ENST00000553529 TSC1Q92574 1164 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 CENPTQ96BT3 561 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 TRIM11Q96F44 468 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 TSPY26PQ9H489 355 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 MRPL47Q9HD33 250 aaKnown RBP18.41■□□□□ 0.54
SHMT2-206ENST00000553529 SPTLC3Q9NUV7 552 aa18.41■□□□□ 0.54
SHMT2-206ENST00000553529 IPO11Q9UI26 975 aaKnown RBP18.41■□□□□ 0.54
SHMT2-206ENST00000553529 LY6G6EA0A0G2JKS1 128 aa18.4■□□□□ 0.54
SHMT2-206ENST00000553529 CXorf51AA0A1B0GTR3 108 aa18.4■□□□□ 0.54
SHMT2-206ENST00000553529 SRRM3A6NNA2 597 aaPredicted RBP18.4■□□□□ 0.54
SHMT2-206ENST00000553529 TMEM110-MUSTN1A8MSY1 372 aa18.4■□□□□ 0.54
SHMT2-206ENST00000553529 TSPAN6O43657 245 aa18.4■□□□□ 0.54
SHMT2-206ENST00000553529 DFNA5O60443 496 aa18.4■□□□□ 0.54
SHMT2-206ENST00000553529 RALGDSQ12967 914 aa18.4■□□□□ 0.54
SHMT2-206ENST00000553529 PROX2Q3B8N5 592 aa18.4■□□□□ 0.54
SHMT2-206ENST00000553529 SRLQ86TD4 932 aa18.4■□□□□ 0.54
SHMT2-206ENST00000553529 PELI3Q8N2H9 469 aa18.4■□□□□ 0.54
SHMT2-206ENST00000553529 ZNF564Q8TBZ8 553 aaPredicted RBP18.4■□□□□ 0.54
SHMT2-206ENST00000553529 LRIG1Q96JA1 1093 aa18.4■□□□□ 0.54
SHMT2-206ENST00000553529 CINPQ9BW66 212 aaPredicted RBP18.4■□□□□ 0.54
SHMT2-206ENST00000553529 OSBPL1AQ9BXW6 950 aa18.4■□□□□ 0.54
SHMT2-206ENST00000553529 SUV39H2Q9H5I1 410 aa18.4■□□□□ 0.54
SHMT2-206ENST00000553529 TPX2Q9ULW0 747 aaKnown RBP18.4■□□□□ 0.54
SHMT2-206ENST00000553529 U3KQA8 63 aa18.4■□□□□ 0.54
SHMT2-206ENST00000553529 TSPAN11A1L157 253 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 H3BRJ5 948 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 MFSD11O43934 449 aa18.39■□□□□ 0.53
SHMT2-206ENST00000553529 DESP17661 470 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms