RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 IL36AQ9UHA7 158 aa6.97□□□□□ -1.29
PRPF40B-214ENST00000551320 SLC12A6Q9UHW9 1150 aa6.97□□□□□ -1.29
PRPF40B-214ENST00000551320 DNAI1Q9UI46 699 aa6.97□□□□□ -1.29
PRPF40B-214ENST00000551320 FHOD1Q9Y613 1164 aa6.97□□□□□ -1.29
PRPF40B-214ENST00000551320 A0A1W2PNR3 127 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 E9PAM4 449 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 KRIT1O00522 736 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 PMM2O15305 246 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 EFSO43281 561 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 SART1O43290 800 aaKnown RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 MMP20O60882 483 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 HSF2BPO75031 334 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 CLDN11O75508 207 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 UGT2B4P06133 528 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 MMEP08473 750 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 CKMT1AP12532 417 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 ADRB3P13945 408 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 HNRNPA2B1P22626 353 aaKnown RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 OR1E1P30953 314 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 AKT2P31751 481 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 KRT9P35527 623 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 MTIF2P46199 727 aaKnown RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 CXCR3P49682 368 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 CCNHP51946 323 aaPredicted RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 ADKP55263 362 aaKnown RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 CDH4P55283 916 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 CYP4F2P78329 520 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 CFHR1Q03591 330 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 DEUP1Q05D60 604 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 SULT2A1Q06520 285 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 CETN1Q12798 172 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 EIF2B5Q13144 721 aaKnown RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 PDE1CQ14123 709 aaPredicted RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 C11orf91Q3C1V1 193 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 EFHC1Q5JVL4 640 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 COLEC12Q5KU26 742 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 FAM102AQ5T9C2 384 aaPredicted RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 CDCP2Q5VXM1 449 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 RWDD4Q6NW29 188 aaKnown RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 GBP6Q6ZN66 633 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 RIPOR1Q6ZS17 1223 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 RD3Q7Z3Z2 195 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 DSG4Q86SJ6 1040 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 NOP9Q86U38 636 aaKnown RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 XYLT1Q86Y38 959 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 DNAAF5Q86Y56 855 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 PYROXD2Q8N2H3 581 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 JOSD2Q8TAC2 188 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 SLC30A5Q8TAD4 765 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 GPT2Q8TD30 523 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 JPH3Q8WXH2 748 aaPredicted RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 TSACCQ96A04 125 aaPredicted RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 PRR11Q96HE9 360 aaPredicted RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 HIC2Q96JB3 615 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 HSH2DQ96JZ2 352 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 EXOC2Q96KP1 924 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 KLF6Q99612 283 aaPredicted RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 SLC17A9Q9BYT1 436 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 CLPBQ9H078 707 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 ABCG4Q9H172 646 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 SUDS3Q9H7L9 328 aaPredicted RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 PREBQ9HCU5 417 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 ATP13A1Q9HD20 1204 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 ASCL3Q9NQ33 180 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 ARHGEF38Q9NXL2 777 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 HECAQ9UBI9 543 aaPredicted RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 GULP1Q9UBP9 304 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 APEX2Q9UBZ4 518 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 ZNF212Q9UDV6 495 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 IPO11Q9UI26 975 aaKnown RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 HS3ST2Q9Y278 367 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 TBC1D30Q9Y2I9 924 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 FADS3Q9Y5Q0 445 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 GPC6Q9Y625 555 aaPredicted RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 TLN1Q9Y490 2541 aaKnown RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 COL27A1Q8IZC6 1860 aaPredicted RBP6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 COL6A6A6NMZ7 2263 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 AHCTF1Q8WYP5 2266 aa6.96□□□□□ -1.3
PRPF40B-214ENST00000551320 DRGXA6NNA5 263 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 C16orf96A6NNT2 1141 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 A8MX80 341 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 PES1O00541 588 aaKnown RBP6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 P4HA2O15460 535 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 PIGNO95427 931 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 C1SP09871 688 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 MPSTP25325 297 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 ACTN2P35609 894 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 IGFALSP35858 605 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 PDX1P52945 283 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 SLC12A1Q13621 1099 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 PTPRRQ15256 657 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 EXOC3L4Q17RC7 722 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 ISXQ2M1V0 245 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 ZSCAN23Q3MJ62 389 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 CARD16Q5EG05 197 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 PRRT3Q5FWE3 981 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 FAM182AQ5T1J6 154 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 NAA35Q5VZE5 725 aa6.95□□□□□ -1.3
PRPF40B-214ENST00000551320 SLC26A9Q7LBE3 791 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms