RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 PREBQ9HCU5 417 aa19.58■□□□□ 0.72
DDX54-207ENST00000550016 SCUBE2Q9NQ36 999 aa19.58■□□□□ 0.72
DDX54-207ENST00000550016 VPS45Q9NRW7 570 aa19.58■□□□□ 0.72
DDX54-207ENST00000550016 TMEM74BQ9NUR3 256 aa19.58■□□□□ 0.72
DDX54-207ENST00000550016 RBM22Q9NW64 420 aaKnown RBP eCLIP19.58■□□□□ 0.72
DDX54-207ENST00000550016 TPX2Q9ULW0 747 aaKnown RBP19.58■□□□□ 0.72
DDX54-207ENST00000550016 CACNA1EQ15878 2313 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.57■□□□□ 0.72
DDX54-207ENST00000550016 ZSCAN12O43309 604 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 AP1G1O43747 822 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 NEBLO76041 1014 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 IGHV4-34P06331 123 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 ZNF806P0C7X5 589 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 TGM1P22735 817 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 MAOBP27338 520 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 SERPINA4P29622 427 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 BCL2L1Q07817 233 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 ZNF211Q13398 564 aaPredicted RBP19.57■□□□□ 0.72
DDX54-207ENST00000550016 CCDC6Q16204 474 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 CSRP2Q16527 193 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 MEI1Q5TIA1 1274 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 CCDC181Q5TID7 509 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 PEAR1Q5VY43 1037 aaPredicted RBP19.57■□□□□ 0.72
DDX54-207ENST00000550016 AADACL2Q6P093 401 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 TTC7BQ86TV6 843 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 CAMK1DQ8IU85 385 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 TRIM58Q8NG06 486 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 SNX19Q92543 992 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 IL12RB2Q99665 862 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 HERPUD2Q9BSE4 406 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 PARD6AQ9NPB6 346 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 SEMA4GQ9NTN9 838 aa19.57■□□□□ 0.72
DDX54-207ENST00000550016 EIF2B4Q9UI10 523 aaKnown RBP19.57■□□□□ 0.72
DDX54-207ENST00000550016 TP53BP1Q12888 1972 aaPredicted RBP19.57■□□□□ 0.72
DDX54-207ENST00000550016 TTC24A2A3L6 582 aaPredicted RBP19.56■□□□□ 0.72
DDX54-207ENST00000550016 APOC4-APOC2K7ER74 178 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 KCNK1O00180 336 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 GJB3O75712 270 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 TJP3O95049 919 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 JCHAINP01591 159 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 APOC2P02655 101 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 TIMP2P16035 220 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 CES1P23141 567 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 MAXP61244 160 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 IFI35P80217 286 aaPredicted RBP19.56■□□□□ 0.72
DDX54-207ENST00000550016 ITKQ08881 620 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 CCDC173Q0VFZ6 552 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 RPS6KA1Q15418 735 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 BRAT1Q6PJG6 821 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 RABEPKQ7Z6M1 372 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 TRIM69Q86WT6 500 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 REXO1L1PQ8IX06 675 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 CEP76Q8TAP6 659 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 TFB1MQ8WVM0 346 aaKnown RBP19.56■□□□□ 0.72
DDX54-207ENST00000550016 NSMCE3Q96MG7 304 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 POLR1EQ9GZS1 481 aaKnown RBP19.56■□□□□ 0.72
DDX54-207ENST00000550016 MIR1-1HGQ9H1L0 117 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 NOD2Q9HC29 1040 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 SUSD2Q9UGT4 822 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 ATP8A1Q9Y2Q0 1164 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 FADS3Q9Y5Q0 445 aa19.56■□□□□ 0.72
DDX54-207ENST00000550016 ATXN2Q99700 1313 aaKnown RBP19.55■□□□□ 0.72
DDX54-207ENST00000550016 TSPAN11A1L157 253 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 HACD1B0YJ81 288 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 RNGTTO60942 597 aaKnown RBP19.55■□□□□ 0.72
DDX54-207ENST00000550016 PCDH8O95206 1070 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 GNSP15586 552 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 CD27P26842 260 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 ABL2P42684 1182 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 SUOXP51687 545 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 XRCC4Q13426 336 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 PRKD1Q15139 912 aaPredicted RBP19.55■□□□□ 0.72
DDX54-207ENST00000550016 DUOXA1Q1HG43 343 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 CFAP58Q5T655 872 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 ALG1LQ6GMV1 187 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 B4GALNT4Q76KP1 1039 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 HAUS1Q96CS2 278 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 SEMA3CQ99985 751 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 GVINP1Q7Z2Y8 2422 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 USP34Q70CQ2 3546 aa19.55■□□□□ 0.72
DDX54-207ENST00000550016 A0A1W2PPC4 97 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 KHNYNO15037 678 aaKnown RBP19.54■□□□□ 0.72
DDX54-207ENST00000550016 MTSS1O43312 755 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 LATO43561 262 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 TSPAN6O43657 245 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 FOXD2O60548 495 aaPredicted RBP19.54■□□□□ 0.72
DDX54-207ENST00000550016 SOCS5O75159 536 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 HLA-DQB2P05538 268 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 XPAP23025 273 aaPredicted RBP19.54■□□□□ 0.72
DDX54-207ENST00000550016 HOXD11P31277 338 aaPredicted RBP19.54■□□□□ 0.72
DDX54-207ENST00000550016 NUDT1P36639 197 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 PPP2CBP62714 309 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 PPP2CAP67775 309 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 NOMO1Q15155 1222 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 PRPF39Q86UA1 669 aaKnown RBP19.54■□□□□ 0.72
DDX54-207ENST00000550016 ZC3H18Q86VM9 953 aaKnown RBP19.54■□□□□ 0.72
DDX54-207ENST00000550016 PAF1Q8N7H5 531 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 C1orf216Q8TAB5 229 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 ECHDC3Q96DC8 303 aa19.54■□□□□ 0.72
DDX54-207ENST00000550016 FEM1CQ96JP0 617 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms