RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 SPTY2D1-AS1A0A0U1RR47 76 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 H3BM21 787 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 SMAD6O43541 496 aaKnown RBP15.79■□□□□ 0.12
TCHP-208ENST00000549550 SNAP91O60641 907 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 CLDN11O75508 207 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 PRNPP04156 253 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 H2AFZP0C0S5 128 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 KRT5P13647 590 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 CYP11B1P15538 503 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 RRM1P23921 792 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 CDR2Q01850 454 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 CLN3Q13286 438 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 FGL2Q14314 439 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 TCEAL1Q15170 157 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 DEFB133Q30KQ1 61 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 ARSIQ5FYB1 569 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 KYAT3Q6YP21 454 aaKnown RBP15.79■□□□□ 0.12
TCHP-208ENST00000549550 H2AFVQ71UI9 128 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 PARGQ86W56 976 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 DEFB106AQ8N104 65 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 ARL14Q8N4G2 192 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 CHST14Q8NCH0 376 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 ALS2CR12Q96Q35 445 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 PSMB7Q99436 277 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 HDAC8Q9BY41 377 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 LZTFL1Q9NQ48 299 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 VPS51Q9UID3 782 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 KLF15Q9UIH9 416 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 NOCTQ9UK39 431 aaKnown RBP15.79■□□□□ 0.12
TCHP-208ENST00000549550 HS3ST4Q9Y661 456 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 CSNK1G3Q9Y6M4 447 aa15.79■□□□□ 0.12
TCHP-208ENST00000549550 FLNCQ14315 2725 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 EME2A4GXA9 379 aaPredicted RBP15.78■□□□□ 0.12
TCHP-208ENST00000549550 RAD51BO15315 384 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 AQP9O43315 295 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 TNFSF15O95150 251 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 PAK4O96013 591 aaPredicted RBP15.78■□□□□ 0.12
TCHP-208ENST00000549550 CSRP3P50461 194 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 GNG11P61952 73 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 RPS21P63220 83 aaKnown RBP15.78■□□□□ 0.12
TCHP-208ENST00000549550 NFATC3Q12968 1075 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 NME3Q13232 169 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 PDCLQ13371 301 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 C14orf80Q86SX3 495 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 CLEC14AQ86T13 490 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 TPCN2Q8NHX9 752 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 WDR36Q8NI36 951 aaKnown RBP15.78■□□□□ 0.12
TCHP-208ENST00000549550 TRIM11Q96F44 468 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 PPP1R16AQ96I34 528 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 SLC2A13Q96QE2 648 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 C2orf49Q9BVC5 232 aaPredicted RBP15.78■□□□□ 0.12
TCHP-208ENST00000549550 SLC17A9Q9BYT1 436 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 TRIM4Q9C037 500 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 FAM117AQ9C073 453 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 ISCUQ9H1K1 167 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 TNKS2Q9H2K2 1166 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 IL36AQ9UHA7 158 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 SALL4Q9UJQ4 1053 aa15.78■□□□□ 0.12
TCHP-208ENST00000549550 TLN1Q9Y490 2541 aaKnown RBP15.77■□□□□ 0.12
TCHP-208ENST00000549550 ANKRD62A6NC57 917 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 DDX3XO00571 662 aaKnown RBP eCLIP15.77■□□□□ 0.12
TCHP-208ENST00000549550 MUSKO15146 869 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 CASC3O15234 703 aaKnown RBP15.77■□□□□ 0.12
TCHP-208ENST00000549550 MED7O43513 233 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 PAGE1O75459 146 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 LEFTY1O75610 366 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 TCEA3O75764 348 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 CNTN5O94779 1100 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 RHOCP08134 193 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 TMEM253P0C7T8 217 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 JUNDP17535 347 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 CASQ1P31415 396 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 USP8P40818 1118 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 RABIFP47224 123 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 NEK3P51956 506 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 CDH4P55283 916 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 PDE1CQ14123 709 aaPredicted RBP15.77■□□□□ 0.12
TCHP-208ENST00000549550 NR0B2Q15466 257 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 ARL13BQ3SXY8 428 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 PERM1Q5SV97 790 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 KIAA1161Q6NSJ0 714 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 LINGO4Q6UY18 593 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 EXD3Q8N9H8 876 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 LMX1AQ8TE12 382 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 ZNF606Q8WXB4 792 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 CCNL2Q96S94 520 aaPredicted RBP15.77■□□□□ 0.12
TCHP-208ENST00000549550 IL12RB2Q99665 862 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 SIK2Q9H0K1 926 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 ACP6Q9NPH0 428 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 WDR70Q9NW82 654 aa15.77■□□□□ 0.12
TCHP-208ENST00000549550 IPO11Q9UI26 975 aaKnown RBP15.77■□□□□ 0.12
TCHP-208ENST00000549550 HEMK1Q9Y5R4 338 aaPredicted RBP15.77■□□□□ 0.12
TCHP-208ENST00000549550 BSNQ9UPA5 3926 aa15.77■□□□□ 0.11
TCHP-208ENST00000549550 RIOK3O14730 519 aaKnown RBP15.76■□□□□ 0.11
TCHP-208ENST00000549550 THAP12O43422 761 aa15.76■□□□□ 0.11
TCHP-208ENST00000549550 HSF2BPO75031 334 aa15.76■□□□□ 0.11
TCHP-208ENST00000549550 GRAP2O75791 330 aa15.76■□□□□ 0.11
TCHP-208ENST00000549550 ENDOD1O94919 500 aa15.76■□□□□ 0.11
TCHP-208ENST00000549550 LSM8O95777 96 aaKnown RBP15.76■□□□□ 0.11
TCHP-208ENST00000549550 GLI1P08151 1106 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms