RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 SHANK3Q9BYB0 1731 aa4.2□□□□□ -1.74
CNOT2-216ENST00000548939 LRPPRCP42704 1394 aaKnown RBP4.19□□□□□ -1.74
CNOT2-216ENST00000548939 PCNTO95613 3336 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 DDTLA6NHG4 134 aaPredicted RBP4.19□□□□□ -1.74
CNOT2-216ENST00000548939 NPIPB13A6NJU9 1138 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 NPIPB5A8MRT5 1133 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 EFCAB8A8MWE9 144 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 NPIPB4C9JG80 1138 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 LMX1BO60663 402 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 DDAH2O95865 285 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 PEX5P50542 639 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 MYBPHQ13203 477 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 CTTNQ14247 550 aaKnown RBP4.19□□□□□ -1.74
CNOT2-216ENST00000548939 TYW3Q6IPR3 259 aaKnown RBP4.19□□□□□ -1.74
CNOT2-216ENST00000548939 ZNF771Q7L3S4 317 aaPredicted RBP4.19□□□□□ -1.74
CNOT2-216ENST00000548939 PATL1Q86TB9 770 aaKnown RBP4.19□□□□□ -1.74
CNOT2-216ENST00000548939 DCUN1D3Q8IWE4 304 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 SPATA20Q8TB22 786 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 C2CD4CQ8TF44 421 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 CCDC138Q96M89 665 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 CADM1Q9BY67 442 aaKnown RBP4.19□□□□□ -1.74
CNOT2-216ENST00000548939 SLC22A11Q9NSA0 550 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 USP32Q8NFA0 1604 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 PTPN23Q9H3S7 1636 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 PLCH1Q4KWH8 1693 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 GCC2Q8IWJ2 1684 aa4.19□□□□□ -1.74
CNOT2-216ENST00000548939 ADGRL2O95490 1459 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 PXDNQ92626 1479 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 NALCNQ8IZF0 1738 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 TMEM131LA2VDJ0 1609 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 METP08581 1390 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 KIF15Q9NS87 1388 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 A0A0U1RQJ8 604 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 A0A1B0GVM2 712 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 AQP12BA6NM10 295 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 CLGNO14967 610 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 CKMT1AP12532 417 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 AMD1P17707 334 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 CXCR3P49682 368 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 CDK7P50613 346 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 ATPAF1Q5TC12 328 aaPredicted RBP4.18□□□□□ -1.74
CNOT2-216ENST00000548939 STPG1Q5TH74 334 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 TRIM74Q86UV6 250 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 TRIM73Q86UV7 250 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 SCN4BQ8IWT1 228 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 NAGSQ8N159 534 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 PARD3BQ8TEW8 1205 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 BICD1Q96G01 975 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 BRD8Q9H0E9 1235 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 SEPSECSQ9HD40 501 aaKnown RBP4.18□□□□□ -1.74
CNOT2-216ENST00000548939 KLHL42Q9P2K6 505 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 SLC45A1Q9Y2W3 748 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 RREB1Q92766 1687 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 EEA1Q15075 1411 aa4.18□□□□□ -1.74
CNOT2-216ENST00000548939 DUOX2Q9NRD8 1548 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 DYTNA2CJ06 578 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 MAGEA13PA6NCF6 341 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 KIF1CO43896 1103 aaKnown RBP4.17□□□□□ -1.74
CNOT2-216ENST00000548939 CCNT1O60563 726 aaKnown RBP4.17□□□□□ -1.74
CNOT2-216ENST00000548939 DPP6P42658 865 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 XKR9Q5GH70 373 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 SYTL1Q8IYJ3 562 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 RBFAQ8N0V3 343 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 ZNF114Q8NC26 417 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 SLC2A12Q8TD20 617 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 STYXQ8WUJ0 223 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 ARRDC3Q96B67 414 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 TEFMQ96QE5 360 aaKnown RBP4.17□□□□□ -1.74
CNOT2-216ENST00000548939 PIGSQ96S52 555 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 ABHD16BQ9H3Z7 469 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 NFS1Q9Y697 457 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 LAMC1P11047 1609 aa4.17□□□□□ -1.74
CNOT2-216ENST00000548939 XRN1Q8IZH2 1706 aaKnown RBP4.16□□□□□ -1.74
CNOT2-216ENST00000548939 NWD2Q9ULI1 1742 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 ARHGEF5Q12774 1597 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 ANO9A1A5B4 782 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 PRAC2D3DTV9 90 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 TULP2O00295 520 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 SYN3O14994 580 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 AFPP02771 609 aaKnown RBP4.16□□□□□ -1.74
CNOT2-216ENST00000548939 LYL1P12980 280 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 ABCB4P21439 1286 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 ARL16Q0P5N6 197 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 DLG1Q12959 904 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 HDAC1Q13547 482 aaPredicted RBP4.16□□□□□ -1.74
CNOT2-216ENST00000548939 PMS2CLQ68D20 193 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 NCAPH2Q6IBW4 605 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 ADAM5Q6NVV9 412 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 AADACL2Q6P093 401 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 NFRKBQ6P4R8 1299 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 RHBDF2Q6PJF5 856 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 C9orf139Q6ZV77 190 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 GALNT7Q86SF2 657 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 ANKRD13AQ8IZ07 590 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 ANKRD44Q8N8A2 993 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 RTKNQ9BST9 563 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 NPFFR1Q9GZQ6 430 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 ACAD9Q9H845 621 aa4.16□□□□□ -1.74
CNOT2-216ENST00000548939 CASZ1Q86V15 1759 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms