RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 TCEAL2Q9H3H9 227 aaPredicted RBP12.61□□□□□ -0.39
GCN1-204ENST00000548132 AIPL1Q9NZN9 384 aa12.61□□□□□ -0.39
GCN1-204ENST00000548132 NENFQ9UMX5 172 aa12.61□□□□□ -0.39
GCN1-204ENST00000548132 TSPAN6O43657 245 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 BUB1O43683 1085 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 TLX3O43711 291 aaPredicted RBP12.6□□□□□ -0.39
GCN1-204ENST00000548132 MAGEC1O60732 1142 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 IGSF6O95976 241 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 PAK4O96013 591 aaPredicted RBP12.6□□□□□ -0.39
GCN1-204ENST00000548132 CKMT2P17540 419 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 GM2AP17900 193 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 PSMA2P25787 234 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 MMP12P39900 470 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 ZNF165P49910 485 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 YBEYP58557 167 aaPredicted RBP12.6□□□□□ -0.39
GCN1-204ENST00000548132 RHOAP61586 193 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 CYP4F3Q08477 520 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 ZNF211Q13398 564 aaPredicted RBP12.6□□□□□ -0.39
GCN1-204ENST00000548132 INO80DQ53TQ3 878 aaPredicted RBP12.6□□□□□ -0.39
GCN1-204ENST00000548132 TXNRD3NBQ6F5E7 133 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 DCUN1D2Q6PH85 259 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 GDPD4Q6W3E5 623 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 PARGQ86W56 976 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 RYBPQ8N488 228 aaPredicted RBP12.6□□□□□ -0.39
GCN1-204ENST00000548132 CASKIN2Q8WXE0 1202 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 ASB12Q8WXK4 309 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 FUBP1Q96AE4 644 aaKnown RBP12.6□□□□□ -0.39
GCN1-204ENST00000548132 RAB7BQ96AH8 199 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 CENPTQ96BT3 561 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 ZNF653Q96CK0 615 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 IFT43Q96FT9 208 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 VCPIP1Q96JH7 1222 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 MBNL1Q9NR56 388 aaKnown RBP12.6□□□□□ -0.39
GCN1-204ENST00000548132 DKK3Q9UBP4 350 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 LHX6Q9UPM6 363 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 HS3ST3A1Q9Y663 406 aa12.6□□□□□ -0.39
GCN1-204ENST00000548132 ARHGEF17Q96PE2 2063 aaPredicted RBP12.59□□□□□ -0.39
GCN1-204ENST00000548132 BUB1BO60566 1050 aaPredicted RBP12.59□□□□□ -0.39
GCN1-204ENST00000548132 POP4O95707 220 aaKnown RBP12.59□□□□□ -0.39
GCN1-204ENST00000548132 CSF2P04141 144 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 CELA2BP08218 269 aaPredicted RBP12.59□□□□□ -0.39
GCN1-204ENST00000548132 C1SP09871 688 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 SKILP12757 684 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 TIMP2P16035 220 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 MIPP30301 263 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 HTR7P34969 479 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 RALGDSQ12967 914 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 NR1I3Q14994 352 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 IRF4Q15306 451 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 COL28A1Q2UY09 1125 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 FIGNQ5HY92 759 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 CDCP2Q5VXM1 449 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 RFX8Q6ZV50 586 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 LUZP1Q86V48 1076 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 ZSCAN30Q86W11 494 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 CPNE8Q86YQ8 564 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 DCBLD1Q8N8Z6 715 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 APOLD1Q96LR9 279 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 LRRC61Q9BV99 259 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 SLC39A8Q9C0K1 460 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 DHX35Q9H5Z1 703 aaKnown RBP12.59□□□□□ -0.39
GCN1-204ENST00000548132 CATSPERBQ9H7T0 1116 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 CBX8Q9HC52 389 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 PARVAQ9NVD7 372 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 ETNK2Q9NVF9 386 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 DNAJC28Q9NX36 388 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 NLGN3Q9NZ94 848 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 UBA2Q9UBT2 640 aaPredicted RBP12.59□□□□□ -0.39
GCN1-204ENST00000548132 CNOT8Q9UFF9 292 aaKnown RBP12.59□□□□□ -0.39
GCN1-204ENST00000548132 COQ6Q9Y2Z9 468 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 PCDHB1Q9Y5F3 818 aa12.59□□□□□ -0.39
GCN1-204ENST00000548132 A0A1W2PNU3 283 aaPredicted RBP12.58□□□□□ -0.4
GCN1-204ENST00000548132 SYCE3A1L190 88 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 K7ESM1 405 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 EEF2KO00418 725 aaKnown RBP12.58□□□□□ -0.4
GCN1-204ENST00000548132 LZTS3O60299 673 aaPredicted RBP12.58□□□□□ -0.4
GCN1-204ENST00000548132 MMP20O60882 483 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 PEX11BO96011 259 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 PRKCGP05129 697 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 CKMT1AP12532 417 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 GZMAP12544 262 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 ERCC2P18074 760 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 TNFAIP3P21580 790 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 RABIFP47224 123 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 NDST2P52849 883 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 SLC25A11Q02978 314 aaKnown RBP12.58□□□□□ -0.4
GCN1-204ENST00000548132 CCDC15Q0P6D6 951 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 TARDBPQ13148 414 aaKnown RBP eCLIP12.58□□□□□ -0.4
GCN1-204ENST00000548132 ILKQ13418 452 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 PDE1CQ14123 709 aaPredicted RBP12.58□□□□□ -0.4
GCN1-204ENST00000548132 C19orf48Q6RUI8 117 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 VPS36Q86VN1 386 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 PDCD7Q8N8D1 485 aaKnown RBP12.58□□□□□ -0.4
GCN1-204ENST00000548132 TSEN2Q8NCE0 465 aaKnown RBP12.58□□□□□ -0.4
GCN1-204ENST00000548132 ECHDC3Q96DC8 303 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 NXPE2Q96DL1 559 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 WRAP53Q9BUR4 548 aaKnown RBP12.58□□□□□ -0.4
GCN1-204ENST00000548132 CPEB1Q9BZB8 566 aaKnown RBP12.58□□□□□ -0.4
GCN1-204ENST00000548132 ISCUQ9H1K1 167 aa12.58□□□□□ -0.4
GCN1-204ENST00000548132 SCUBE2Q9NQ36 999 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms