RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 LRRC8BQ6P9F7 803 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 RANBP10Q6VN20 620 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 DPY19L3Q6ZPD9 716 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 PAF1Q8N7H5 531 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 DNAAF3Q8N9W5 541 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 OR8D1Q8WZ84 308 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 PTPRN2Q92932 1015 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 MRGPRX2Q96LB1 330 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 FICDQ9BVA6 458 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 TDRD1Q9BXT4 1180 aaKnown RBP16■□□□□ 0.15
TRAFD1-203ENST00000547063 ZDHHC6Q9H6R6 413 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 FBRSQ9HAH7 460 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 ARNT2Q9HBZ2 717 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 CA14Q9ULX7 337 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 RAI2Q9Y5P3 530 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 STON1Q9Y6Q2 735 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 C5orf42Q9H799 3197 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 LOC285095A0A1B0GVY8 99 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 TP73O15350 636 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 NDST3O95803 873 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 FGF1P05230 155 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 NFKBIAP25963 317 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 ADRA1AP35348 466 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 TIE1P35590 1138 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 IL12RB1P42701 662 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 NPY2RP49146 381 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 SEC13P55735 322 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 STARD6P59095 220 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 CBLBQ13191 982 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 STARD3Q14849 445 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 SLMAPQ14BN4 828 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 FAM182AQ5T1J6 154 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 SYCP2LQ5T4T6 812 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 CFAP58Q5T655 872 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 ARMC12Q5T9G4 340 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 EMBQ6PCB8 327 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 SFTPA1Q8IWL2 248 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 NDUFAF2Q8N183 169 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 TMIEQ8NEW7 156 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 HCAR2Q8TDS4 363 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 LRRC39Q96DD0 335 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 SERPINB12Q96P63 405 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 SRPK1Q96SB4 655 aaKnown RBP15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 CASS4Q9NQ75 786 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 CACNA2D2Q9NY47 1150 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 BFARQ9NZS9 450 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 IL36AQ9UHA7 158 aa15.99■□□□□ 0.15
TRAFD1-203ENST00000547063 TCRBV7S3A2A0A539 114 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 TTC24A2A3L6 582 aaPredicted RBP15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 GOLGA8MH3BSY2 632 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 HTRA2O43464 458 aaPredicted RBP15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 RNASEH1O60930 286 aaKnown RBP15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 AGTP01019 485 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 PRKCHP24723 683 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 ECHS1P30084 290 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 POLR2LP62875 67 aaKnown RBP15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 LAMB3Q13751 1172 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 CCINQ13939 588 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 SPARCL1Q14515 664 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 SLC1A5Q15758 541 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 C2orf27AQ580R0 203 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 EOGTQ5NDL2 527 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 C9orf64Q5T6V5 341 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 EMC10Q5UCC4 262 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 GDPD4Q6W3E5 623 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 SPOCK2Q92563 424 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 EZH1Q92800 747 aaPredicted RBP15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 PPP1R16AQ96I34 528 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 GABRG3Q99928 467 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 SUV39H2Q9H5I1 410 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 HCN2Q9UL51 889 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 NDRG2Q9UN36 371 aaKnown RBP15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 PCDHGC4Q9Y5F7 938 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 TCF20Q9UGU0 1960 aaKnown RBP15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 ANKRD36A6QL64 1941 aa15.98■□□□□ 0.15
TRAFD1-203ENST00000547063 KANSL1LA0AUZ9 987 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 C1QTNF3-AMACRE9PGA6 284 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 SIN3BO75182 1162 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 GJB3O75712 270 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 PGLSO95336 258 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 KLF8O95600 359 aaPredicted RBP15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 ALADP13716 330 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 HLA-EP13747 358 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 EPHB1P54762 984 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 TRAF2Q12933 501 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 CAMK2GQ13555 558 aaPredicted RBP15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 TJAP1Q5JTD0 557 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 IER5LQ5T953 404 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 FAM46CQ5VWP2 391 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 BRAT1Q6PJG6 821 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 CAND1Q86VP6 1230 aaKnown RBP15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 CCDC25Q86WR0 208 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 CAMK1DQ8IU85 385 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 CCNJLQ8IV13 435 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 IL17RCQ8NAC3 791 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 OR52K1Q8NGK4 314 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 OR6K2Q8NGY2 324 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 PDCD6IPQ8WUM4 868 aaKnown RBP15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 RMDN1Q96DB5 314 aa15.97■□□□□ 0.15
TRAFD1-203ENST00000547063 TRIB3Q96RU7 358 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms