RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 TMPRSS4Q9NRS4 437 aa9.4□□□□□ -0.9
SSH1-205ENST00000546812 FANCLQ9NW38 375 aa9.4□□□□□ -0.9
SSH1-205ENST00000546812 TAB2Q9NYJ8 693 aa9.4□□□□□ -0.9
SSH1-205ENST00000546812 VPS51Q9UID3 782 aa9.4□□□□□ -0.9
SSH1-205ENST00000546812 APPL1Q9UKG1 709 aa9.4□□□□□ -0.9
SSH1-205ENST00000546812 GPR34Q9UPC5 381 aa9.4□□□□□ -0.9
SSH1-205ENST00000546812 COQ4Q9Y3A0 265 aa9.4□□□□□ -0.9
SSH1-205ENST00000546812 TOR1BO14657 336 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 ZNF821O75541 412 aaPredicted RBP9.39□□□□□ -0.91
SSH1-205ENST00000546812 PRKCSHP14314 528 aaPredicted RBP9.39□□□□□ -0.91
SSH1-205ENST00000546812 TBXAS1P24557 533 aaPredicted RBP9.39□□□□□ -0.91
SSH1-205ENST00000546812 EEF1GP26641 437 aaKnown RBP9.39□□□□□ -0.91
SSH1-205ENST00000546812 CCR1P32246 355 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 EIF4A3P38919 411 aaKnown RBP9.39□□□□□ -0.91
SSH1-205ENST00000546812 BLKP51451 505 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 CDH4P55283 916 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 YWHAZP63104 245 aaKnown RBP9.39□□□□□ -0.91
SSH1-205ENST00000546812 PITX1P78337 314 aaPredicted RBP9.39□□□□□ -0.91
SSH1-205ENST00000546812 IQCB1Q15051 598 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 C5orf22Q49AR2 442 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 TCP11X2Q5H9J9 407 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 CRYBG3Q68DQ2 2970 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 C22orf39Q6P5X5 142 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 LINGO4Q6UY18 593 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 MACC1Q6ZN28 852 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 SLITRK4Q8IW52 837 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 Q8N9G6 341 aaPredicted RBP9.39□□□□□ -0.91
SSH1-205ENST00000546812 GPBAR1Q8TDU6 330 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 RAB7BQ96AH8 199 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 CDH19Q9H159 772 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 ST7Q9NRC1 585 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 VANGL2Q9ULK5 521 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.39□□□□□ -0.91
SSH1-205ENST00000546812 RNF215Q9Y6U7 377 aa9.39□□□□□ -0.91
SSH1-205ENST00000546812 TRPM6Q9BX84 2022 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 ZNF891A8MT65 544 aaPredicted RBP9.38□□□□□ -0.91
SSH1-205ENST00000546812 SMTNL1A8MU46 457 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 BECN2A8MW95 431 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 RNF225M0QZC1 329 aaPredicted RBP9.38□□□□□ -0.91
SSH1-205ENST00000546812 NEMP1O14524 444 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 MTSS1O43312 755 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 ENDOD1O94919 500 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 AGFG2O95081 481 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 ATP1A3P13637 1013 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 CTSEP14091 401 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 LIFP15018 202 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 PNLIPP16233 465 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 GLB1P16278 677 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 BRD2P25440 801 aaKnown RBP9.38□□□□□ -0.91
SSH1-205ENST00000546812 IGFALSP35858 605 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 GPD2P43304 727 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 ACADSBP45954 432 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 FMO5P49326 533 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 HK3P52790 923 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 KLRB1Q12918 225 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 MTA1Q13330 715 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 KRT31Q15323 416 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 MAN2A1Q16706 1144 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 PHF19Q5T6S3 580 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 PARS2Q7L3T8 475 aaKnown RBP9.38□□□□□ -0.91
SSH1-205ENST00000546812 VPS36Q86VN1 386 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 GKN2Q86XP6 184 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 IL22RA1Q8N6P7 574 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 DCAF4L2Q8NA75 395 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 GPR156Q8NFN8 814 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 STK32AQ8WU08 396 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 ABHD17AQ96GS6 310 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 HEPHQ9BQS7 1158 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 EDEM3Q9BZQ6 932 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 SEMA6CQ9H3T2 930 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 FAM204AQ9H8W3 233 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 AKAP7Q9P0M2 348 aaPredicted RBP9.38□□□□□ -0.91
SSH1-205ENST00000546812 SRPK3Q9UPE1 567 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 PCDHB4Q9Y5E5 795 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 PCDHGA3Q9Y5H0 932 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 HS3ST4Q9Y661 456 aa9.38□□□□□ -0.91
SSH1-205ENST00000546812 C2CD3Q4AC94 2353 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 A0A0D9SEW6 157 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 TMEM110-MUSTN1A8MSY1 372 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 GOLGA6L19H0YKK7 550 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 PES1O00541 588 aaKnown RBP9.37□□□□□ -0.91
SSH1-205ENST00000546812 CAPN5O15484 640 aaPredicted RBP9.37□□□□□ -0.91
SSH1-205ENST00000546812 CNTN5O94779 1100 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 RASGRP1O95267 797 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 CALCAP01258 141 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 RHOCP08134 193 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 CCL4P13236 92 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 UGT1A3P35503 534 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 ABL2P42684 1182 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 PEX5P50542 639 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 DNA2P51530 1060 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 ARSDP51689 593 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 CCNHP51946 323 aaPredicted RBP9.37□□□□□ -0.91
SSH1-205ENST00000546812 CDK17Q00537 523 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 LRMPQ12912 555 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 C16orf72Q14CZ0 275 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 ALG11Q2TAA5 492 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 LACTB2Q53H82 288 aaPredicted RBP9.37□□□□□ -0.91
SSH1-205ENST00000546812 CARD16Q5EG05 197 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 MIIPQ5JXC2 388 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms