RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 TTC7BQ86TV6 843 aa16.99■□□□□ 0.31
CCDC38-203ENST00000546803 ZSCAN30Q86W11 494 aa16.99■□□□□ 0.31
CCDC38-203ENST00000546803 CAMK1DQ8IU85 385 aa16.99■□□□□ 0.31
CCDC38-203ENST00000546803 RGL4Q8IZJ4 473 aa16.99■□□□□ 0.31
CCDC38-203ENST00000546803 TBC1D3Q8IZP1 549 aaPredicted RBP16.99■□□□□ 0.31
CCDC38-203ENST00000546803 GPR161Q8N6U8 529 aaKnown RBP16.99■□□□□ 0.31
CCDC38-203ENST00000546803 ACTL9Q8TC94 416 aa16.99■□□□□ 0.31
CCDC38-203ENST00000546803 LRRN4Q8WUT4 740 aa16.99■□□□□ 0.31
CCDC38-203ENST00000546803 PIGKQ92643 395 aa16.99■□□□□ 0.31
CCDC38-203ENST00000546803 HAUS1Q96CS2 278 aa16.99■□□□□ 0.31
CCDC38-203ENST00000546803 HINFPQ9BQA5 517 aa16.99■□□□□ 0.31
CCDC38-203ENST00000546803 NOD2Q9HC29 1040 aa16.99■□□□□ 0.31
CCDC38-203ENST00000546803 TRMT1Q9NXH9 659 aaKnown RBP16.99■□□□□ 0.31
CCDC38-203ENST00000546803 PILRBQ9UKJ0 227 aa16.99■□□□□ 0.31
CCDC38-203ENST00000546803 ATP8A1Q9Y2Q0 1164 aa16.99■□□□□ 0.31
CCDC38-203ENST00000546803 FANCMQ8IYD8 2048 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 KIF5CO60282 957 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 FOXD2O60548 495 aaPredicted RBP16.98■□□□□ 0.31
CCDC38-203ENST00000546803 FSBPO95073 299 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 GNSP15586 552 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 XPAP23025 273 aaPredicted RBP16.98■□□□□ 0.31
CCDC38-203ENST00000546803 ITPKAP23677 461 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 NUDT1P36639 197 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 POLR2LP62875 67 aaKnown RBP16.98■□□□□ 0.31
CCDC38-203ENST00000546803 OTUD4Q01804 1114 aaKnown RBP16.98■□□□□ 0.31
CCDC38-203ENST00000546803 SLC45A4Q5BKX6 768 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 PLA2G2CQ5R387 149 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 ZC3H18Q86VM9 953 aaKnown RBP16.98■□□□□ 0.31
CCDC38-203ENST00000546803 TRIM69Q86WT6 500 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 SPOCK2Q92563 424 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 BIRC7Q96CA5 298 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 ECHDC3Q96DC8 303 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 QKIQ96PU8 341 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCDC38-203ENST00000546803 VAT1Q99536 393 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 SEMA3CQ99985 751 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 FERMT1Q9BQL6 677 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 TLR10Q9BXR5 811 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 VPS45Q9NRW7 570 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 SUSD2Q9UGT4 822 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 JRKLQ9Y4A0 524 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 FADS3Q9Y5Q0 445 aa16.98■□□□□ 0.31
CCDC38-203ENST00000546803 H7C0C1 242 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 TRAFD1O14545 582 aaPredicted RBP16.97■□□□□ 0.31
CCDC38-203ENST00000546803 KCNK3O14649 394 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 AREL1O15033 823 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 HTRA2O43464 458 aaPredicted RBP16.97■□□□□ 0.31
CCDC38-203ENST00000546803 TSPAN6O43657 245 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 GJB3O75712 270 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 HLA-DQB2P05538 268 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 IGHV4-34P06331 123 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 TIMP2P16035 220 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 CD27P26842 260 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 ABL2P42684 1182 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 ATP5OP48047 213 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 EIF3EP60228 445 aaKnown RBP16.97■□□□□ 0.31
CCDC38-203ENST00000546803 ZBTB17Q13105 803 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 KLF1Q13351 362 aaPredicted RBP16.97■□□□□ 0.31
CCDC38-203ENST00000546803 CSRP2Q16527 193 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 UGP2Q16851 508 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 TEX44Q53QW1 395 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 PRPF39Q86UA1 669 aaKnown RBP16.97■□□□□ 0.31
CCDC38-203ENST00000546803 CDKL3Q8IVW4 592 aaPredicted RBP16.97■□□□□ 0.31
CCDC38-203ENST00000546803 CNTD1Q8N815 330 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 CEP76Q8TAP6 659 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 ARRDC2Q8TBH0 407 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 SNX19Q92543 992 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 FEM1CQ96JP0 617 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 SEPT10Q9P0V9 454 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 TTLL3Q9Y4R7 772 aa16.97■□□□□ 0.31
CCDC38-203ENST00000546803 A0A1W2PPC4 97 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 TTC24A2A3L6 582 aaPredicted RBP16.96■□□□□ 0.31
CCDC38-203ENST00000546803 UPK3BL1B0FP48 263 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 PRR5-ARHGAP8B1AHC4 643 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 UPK3BL2E5RIL1 263 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 NEMP1O14524 444 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 LATO43561 262 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 PCDH8O95206 1070 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 SERPINF2P08697 491 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 ZNF806P0C7X5 589 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 PTPN3P26045 913 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 MAOBP27338 520 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 DSC2Q02487 901 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 SPEM2Q0P670 501 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 ELP6Q0PNE2 266 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 DUOXA1Q1HG43 343 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 ZNF569Q5MCW4 686 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 KIAA1161Q6NSJ0 714 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 HORMAD1Q86X24 394 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 PAF1Q8N7H5 531 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 HTR3CQ8WXA8 447 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 TEKT5Q96M29 485 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 NSMCE3Q96MG7 304 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 FRMD8P1Q9BZ68 369 aaPredicted RBP16.96■□□□□ 0.31
CCDC38-203ENST00000546803 SEMA4GQ9NTN9 838 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 TMEM74BQ9NUR3 256 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 EIF2B4Q9UI10 523 aaKnown RBP16.96■□□□□ 0.31
CCDC38-203ENST00000546803 PYCARDQ9ULZ3 195 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 DMTF1Q9Y222 760 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 PCDHGC4Q9Y5F7 938 aa16.96■□□□□ 0.31
CCDC38-203ENST00000546803 A0A1B0GTW7 788 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms