RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 RGMBQ6NW40 437 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 C16orf87Q6PH81 154 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 FSTL5Q8N475 847 aaPredicted RBP15.81■□□□□ 0.12
CUX1-211ENST00000546411 SIGLEC10Q96LC7 697 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 CIPCQ9C0C6 399 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 ABCG8Q9H221 673 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 SORCS3Q9UPU3 1222 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 MYL4P12829 197 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 ITGALP20701 1170 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 ATP6V1B2P21281 511 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 PBLDP30039 288 aaPredicted RBP15.8■□□□□ 0.12
CUX1-211ENST00000546411 MAP3K10Q02779 954 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 INCA1Q0VD86 236 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 SLC10A2Q12908 348 aaPredicted RBP15.8■□□□□ 0.12
CUX1-211ENST00000546411 GRIK3Q13003 919 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 BOP1Q14137 746 aaKnown RBP15.8■□□□□ 0.12
CUX1-211ENST00000546411 MILR1Q7Z6M3 343 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 CDYL2Q8N8U2 506 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 ZBED3Q96IU2 234 aaPredicted RBP15.8■□□□□ 0.12
CUX1-211ENST00000546411 USP29Q9HBJ7 922 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 E9PAM4 449 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 TM7SF2O76062 418 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 MYO1DO94832 1006 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 URODP06132 367 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 VAV1P15498 845 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 OR1D2P34982 312 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 PSME3P61289 254 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 CDK18Q07002 472 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 RALGDSQ12967 914 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 PRKD1Q15139 912 aaPredicted RBP15.8■□□□□ 0.12
CUX1-211ENST00000546411 CYP51A1Q16850 503 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 FAM126BQ8IXS8 530 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 ARRDC4Q8NCT1 418 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 ESAMQ96AP7 390 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 MTFMTQ96DP5 389 aaKnown RBP15.8■□□□□ 0.12
CUX1-211ENST00000546411 TEKT5Q96M29 485 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 MRPL57Q9BQC6 102 aaKnown RBP15.8■□□□□ 0.12
CUX1-211ENST00000546411 ATP11BQ9Y2G3 1177 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 PCDHB9Q9Y5E1 797 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 CAPN8A6NHC0 703 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 FAM72CH0Y354 149 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 FFAR3O14843 346 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 GPR42O15529 346 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 TGDSO95455 350 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 LINC00032P0C843 101 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 HGFP14210 728 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 ETS2P15036 469 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 MAPK10P53779 464 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 AASDHQ4L235 1098 aaPredicted RBP15.8■□□□□ 0.12
CUX1-211ENST00000546411 FAM72AQ5TYM5 149 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 FAM72DQ6L9T8 149 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 TAPT1Q6NXT6 567 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 TTC23LQ6PF05 361 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 FAM72BQ86X60 149 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 CYP2S1Q96SQ9 504 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 TBCDQ9BTW9 1192 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 SLC39A8Q9C0K1 460 aa15.8■□□□□ 0.12
CUX1-211ENST00000546411 IGKV6D-21A0A0A0MT36 114 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 PRR23AA6NEV1 266 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 OR51F1A6NGY5 319 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 SPATA31D3P0C874 917 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 ZNF135P52742 658 aaPredicted RBP15.79■□□□□ 0.12
CUX1-211ENST00000546411 SPATA31D4Q6ZUB0 917 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 ADCK2Q7Z695 626 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 PSMG2Q969U7 264 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 RNF145Q96MT1 663 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 SH3GL3Q99963 347 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 SLC25A23Q9BV35 468 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 MRGBPQ9NV56 204 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 CLDN10P78369 228 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 DYNC1I2Q13409 638 aaKnown RBP15.79■□□□□ 0.12
CUX1-211ENST00000546411 FAM187BQ17R55 369 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 AARS2Q5JTZ9 985 aaKnown RBP15.79■□□□□ 0.12
CUX1-211ENST00000546411 LINGO4Q6UY18 593 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 CACUL1Q86Y37 369 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 ARFGAP1Q8N6T3 406 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 WDR60Q8WVS4 1066 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 SSU72Q9NP77 194 aaKnown RBP15.79■□□□□ 0.12
CUX1-211ENST00000546411 RPL17P18621 184 aaKnown RBP15.79■□□□□ 0.12
CUX1-211ENST00000546411 RANBP1P43487 201 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 UGT3A1Q6NUS8 523 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 GPSM1Q86YR5 675 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 HPS4Q9NQG7 708 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 CLIC5Q9NZA1 410 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 ADAMTS5Q9UNA0 930 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 TBX10O75333 385 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 RTN3O95197 1032 aaPredicted RBP15.79■□□□□ 0.12
CUX1-211ENST00000546411 CCNG1P51959 295 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 ELAVL2Q12926 359 aaKnown RBP15.79■□□□□ 0.12
CUX1-211ENST00000546411 PGS1Q32NB8 556 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 TTLL9Q3SXZ7 439 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 IL27RAQ6UWB1 636 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 FIG4Q92562 907 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 GRIP2Q9C0E4 1043 aa15.79■□□□□ 0.12
CUX1-211ENST00000546411 CACYBPQ9HB71 228 aaKnown RBP15.79■□□□□ 0.12
CUX1-211ENST00000546411 DDX60Q8IY21 1712 aaKnown RBP15.79■□□□□ 0.12
CUX1-211ENST00000546411 A0A087X1B8 175 aa15.78■□□□□ 0.12
CUX1-211ENST00000546411 IDH3AP50213 366 aa15.78■□□□□ 0.12
CUX1-211ENST00000546411 CLCN5P51795 746 aa15.78■□□□□ 0.12
CUX1-211ENST00000546411 ZNF792Q3KQV3 632 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms