RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 GMPR2Q9P2T1 348 aaKnown RBP15.95■□□□□ 0.14
LDLR-204ENST00000545707 PDCD11Q14690 1871 aaKnown RBP15.95■□□□□ 0.14
LDLR-204ENST00000545707 PRSS51A0A1B0GVH4 220 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 ATP6AP2A0A1C7CYW4 349 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 CCDC160A6NGH7 325 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 SLCO1B7G3V0H7 640 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 CACNG3O60359 315 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 ATP6AP2O75787 350 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 CLPTM1O96005 669 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 NELFEP18615 380 aaKnown RBP15.95■□□□□ 0.14
LDLR-204ENST00000545707 CCNCP24863 283 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 BRCC3P46736 316 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 CD151P48509 253 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 SLC12A2P55011 1212 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 PSME3P61289 254 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 PDAP1Q13442 181 aaKnown RBP15.95■□□□□ 0.14
LDLR-204ENST00000545707 SETD3Q86TU7 594 aaPredicted RBP15.95■□□□□ 0.14
LDLR-204ENST00000545707 CNTN4Q8IWV2 1026 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 CEP70Q8NHQ1 597 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 SPPL2BQ8TCT7 592 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 SH3RF2Q8TEC5 729 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 MRGPRX2Q96LB1 330 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 TSGA13Q96PP4 275 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 FCRL5Q96RD9 977 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 SPON1Q9HCB6 807 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 IGSF5Q9NSI5 407 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 VPS28Q9UK41 221 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 PCDHGA7Q9Y5G6 932 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 PAGE1O75459 146 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 TADA2AO75478 443 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 COL6A2P12110 1019 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 EPHX2P34913 555 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 LSAMPQ13449 338 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 NADK2Q4G0N4 442 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 AGKQ53H12 422 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 BTBD8Q5XKL5 378 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 NEPROQ6NW34 567 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 CYP2R1Q6VVX0 501 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 LRRTM3Q86VH5 581 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 TMEM102Q8N9M5 508 aaPredicted RBP15.94■□□□□ 0.14
LDLR-204ENST00000545707 OR9I1Q8NGQ6 314 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 DNAJC1Q96KC8 554 aaKnown RBP15.94■□□□□ 0.14
LDLR-204ENST00000545707 PRICKLE1Q96MT3 831 aaPredicted RBP15.94■□□□□ 0.14
LDLR-204ENST00000545707 COMMD3-BMI1R4GMX3 469 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 VILLO15195 856 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 AP1G1O43747 822 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 CPB1P15086 417 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 ADRA1AP35348 466 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 PRKAA2P54646 552 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 MAXP61244 160 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 COG7P83436 770 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 CCL14Q16627 93 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 ARMC3Q5W041 872 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 CLEC6AQ6EIG7 209 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 ZFP1Q6P2D0 407 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 C14orf80Q86SX3 495 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 C2CD4AQ8NCU7 369 aaPredicted RBP15.94■□□□□ 0.14
LDLR-204ENST00000545707 ANKRD49Q8WVL7 239 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 FCRL2Q96LA5 508 aaPredicted RBP15.94■□□□□ 0.14
LDLR-204ENST00000545707 IL12RB2Q99665 862 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 MRPL57Q9BQC6 102 aaKnown RBP15.94■□□□□ 0.14
LDLR-204ENST00000545707 SLC39A3Q9BRY0 314 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 MRPL1Q9BYD6 325 aaKnown RBP15.94■□□□□ 0.14
LDLR-204ENST00000545707 CDH9Q9ULB4 789 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 ST3GAL5Q9UNP4 418 aa15.94■□□□□ 0.14
LDLR-204ENST00000545707 C17orf102A2RUQ5 167 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 ARL5CA6NH57 179 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 FBP2O00757 339 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 ANXA9O76027 345 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 POMCP01189 267 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 CCDC166P0CW27 439 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 ATP5F1P24539 256 aaPredicted RBP15.93■□□□□ 0.14
LDLR-204ENST00000545707 YWHAQP27348 245 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 HERC3Q15034 1050 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 PITRM1Q5JRX3 1037 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 LRTOMTQ8WZ04 291 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 MPP4Q96JB8 637 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 MAELQ96JY0 434 aaKnown RBP15.93■□□□□ 0.14
LDLR-204ENST00000545707 UBE2OQ9C0C9 1292 aaKnown RBP15.93■□□□□ 0.14
LDLR-204ENST00000545707 FBRSL1Q9HCM7 1045 aaKnown RBP15.93■□□□□ 0.14
LDLR-204ENST00000545707 VCX3AQ9NNX9 186 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 TREX1Q9NSU2 369 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 FAM105AQ9NUU6 356 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 ARHGEF38Q9NXL2 777 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 RAB26Q9ULW5 256 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 PTCH2Q9Y6C5 1203 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 A8MT66 165 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 F8W810 466 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 MATN3O15232 486 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 SLC22A2O15244 555 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 NPHS1O60500 1241 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 KCNC1P48547 511 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 PIWIL4Q7Z3Z4 852 aaKnown RBP15.93■□□□□ 0.14
LDLR-204ENST00000545707 PELI3Q8N2H9 469 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 TMEM86AQ8N2M4 240 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 ADCY4Q8NFM4 1077 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 GTF3C2Q8WUA4 911 aaPredicted RBP15.93■□□□□ 0.14
LDLR-204ENST00000545707 CASP10Q92851 521 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 Q9H521 79 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 ETAA1Q9NY74 926 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms